Analysis of interatomic Contacts of Structural Units in PDB entry:
4QMJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4QMJ entry

There is 1 chain in PDB entry 4QMJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 852MSE 1080
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4QMJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
862 870Right-handed alpha
Helix 2
2
A
873 892Right-handed alpha
Helix 3
3
A
900 909Right-handed alpha
Helix 4
4
A
913 932Right-handed alpha
Helix 5
5
A
933 939Right-handed 310
Helix 6
6
A
942 950Right-handed alpha
Helix 7
7
A
954 973Right-handed alpha
Helix 8
8
A
974 979Right-handed alpha
Helix 9
9
A
981 989Right-handed alpha
Helix 10
10
A
991 1006Right-handed alpha
Helix 11
11
A
1007 1009Right-handed 310
Helix 12
12
A
1013 1018Right-handed 310
Helix 13
13
A
1019 1027Right-handed alpha
Helix 14
14
A
1031 1041Right-handed alpha
Helix 15
15
A
1041 1050Right-handed alpha
Helix 16
16
A
1050 1058Right-handed alpha
Helix 17
17
A
1059 1061Right-handed 310
Helix 18
18
A
1062 1077Right-handed alpha
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There are no sheets in PDB entry 4QMJ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il