Analysis of interatomic Contacts of Structural Units in PDB entry:
4QOY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4QOY entry

There are 2 chains in PDB entry 4QOY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 5ALA 886
B
 PRO 5ILE 420
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are185 helices in PDB entry 4QOY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 25Right-handed alpha
Helix 2
2
A
29 42Right-handed alpha
Helix 3
3
A
64 68Right-handed 310
Helix 4
4
A
74 99Right-handed alpha
Helix 5
5
A
107 124Right-handed alpha
Helix 6
6
A
140 142Right-handed 310
Helix 7
7
A
143 154Right-handed alpha
Helix 8
8
A
158 163Right-handed alpha
Helix 9
9
A
195 214Right-handed alpha
Helix 10
10
A
231 234Right-handed 310
Helix 11
11
A
235 240Right-handed alpha
Helix 12
12
A
241 248Right-handed alpha
Helix 13
13
A
273 285Right-handed alpha
Helix 14
14
A
295 297Right-handed 310
Helix 15
15
A
298 305Right-handed alpha
Helix 16
16
A
308 317Right-handed alpha
Helix 17
17
A
318 328Right-handed alpha
Helix 18
18
A
329 337Right-handed alpha
Helix 19
19
A
338 340Right-handed 310
Helix 20
20
A
341 348Right-handed alpha
Helix 21
21
A
352 358Right-handed alpha
Helix 22
22
A
361 364Right-handed 310
Helix 23
23
A
365 379Right-handed alpha
Helix 24
24
A
414 424Right-handed alpha
Helix 25
25
A
431 436Right-handed 310
Helix 26
26
A
445 458Right-handed alpha
Helix 27
27
A
478 486Right-handed 310
Helix 28
28
A
493 506Right-handed alpha
Helix 29
29
A
511 513Right-handed 310
Helix 30
30
A
523 527Right-handed 310
Helix 31
31
A
528 536Right-handed alpha
Helix 32
32
A
570 583Right-handed alpha
Helix 33
33
A
583 588Right-handed alpha
Helix 34
34
A
603 617Right-handed alpha
Helix 35
35
A
644 650Right-handed alpha
Helix 36
36
A
662 679Right-handed alpha
Helix 37
37
A
705 712Right-handed alpha
Helix 38
38
A
734 750Right-handed alpha
Helix 39
39
A
760 778Right-handed alpha
Helix 40
40
A
786 792Right-handed alpha
Helix 41
41
A
805 810Right-handed alpha
Helix 42
42
A
811 815Right-handed 310
Helix 43
43
A
833 841Right-handed alpha
Helix 44
44
A
844 859Right-handed alpha
Helix 45
45
A
863 874Right-handed alpha
Helix 46
46
B
10 25Right-handed alpha
Helix 47
47
B
29 45Right-handed alpha
Helix 48
48
B
64 68Right-handed 310
Helix 49
49
B
74 99Right-handed alpha
Helix 50
50
B
107 124Right-handed alpha
Helix 51
51
B
140 142Right-handed 310
Helix 52
52
B
143 154Right-handed alpha
Helix 53
53
B
158 163Right-handed alpha
Helix 54
54
B
195 214Right-handed alpha
Helix 55
55
B
231 234Right-handed 310
Helix 56
56
B
235 240Right-handed alpha
Helix 57
57
B
241 248Right-handed alpha
Helix 58
58
B
273 285Right-handed alpha
Helix 59
59
B
295 297Right-handed 310
Helix 60
60
B
298 305Right-handed alpha
Helix 61
61
B
308 317Right-handed alpha
Helix 62
62
B
318 323Right-handed alpha
Helix 63
63
B
329 337Right-handed alpha
Helix 64
64
B
338 340Right-handed 310
Helix 65
65
B
341 348Right-handed alpha
Helix 66
66
B
352 358Right-handed alpha
Helix 67
67
B
361 364Right-handed 310
Helix 68
68
B
365 379Right-handed alpha
Helix 69
69
B
405 410Right-handed 310
Helix 70
70
B
414 424Right-handed alpha
Helix 71
71
B
431 436Right-handed 310
Helix 72
72
B
445 458Right-handed alpha
Helix 73
73
B
478 486Right-handed 310
Helix 74
74
B
493 506Right-handed alpha
Helix 75
75
B
511 513Right-handed 310
Helix 76
76
B
523 527Right-handed 310
Helix 77
77
B
528 536Right-handed alpha
Helix 78
78
B
570 583Right-handed alpha
Helix 79
79
B
583 588Right-handed alpha
Helix 80
80
B
603 617Right-handed alpha
Helix 81
81
B
644 650Right-handed alpha
Helix 82
82
B
662 679Right-handed alpha
Helix 83
83
B
705 712Right-handed alpha
Helix 84
84
B
734 750Right-handed alpha
Helix 85
85
B
760 778Right-handed alpha
Helix 86
86
B
786 792Right-handed alpha
Helix 87
87
B
805 810Right-handed alpha
Helix 88
88
B
811 815Right-handed 310
Helix 89
89
B
833 841Right-handed alpha
Helix 90
90
B
844 859Right-handed alpha
Helix 91
91
B
863 874Right-handed alpha
Helix 92
92
C
9 26Right-handed alpha
Helix 93
93
C
29 44Right-handed alpha
Helix 94
94
C
64 68Right-handed 310
Helix 95
95
C
74 99Right-handed alpha
Helix 96
96
C
107 124Right-handed alpha
Helix 97
97
C
140 142Right-handed 310
Helix 98
98
C
143 154Right-handed alpha
Helix 99
99
C
158 163Right-handed alpha
Helix 100
100
C
195 214Right-handed alpha
Helix 101
101
C
231 234Right-handed 310
Helix 102
102
C
235 240Right-handed alpha
Helix 103
103
C
241 248Right-handed alpha
Helix 104
104
C
273 285Right-handed alpha
Helix 105
105
C
298 305Right-handed alpha
Helix 106
106
C
308 317Right-handed alpha
Helix 107
107
C
318 327Right-handed alpha
Helix 108
108
C
329 337Right-handed alpha
Helix 109
109
C
338 340Right-handed 310
Helix 110
110
C
341 348Right-handed alpha
Helix 111
111
C
352 358Right-handed alpha
Helix 112
112
C
361 364Right-handed 310
Helix 113
113
C
365 379Right-handed alpha
Helix 114
114
C
405 412Right-handed 310
Helix 115
115
C
414 424Right-handed alpha
Helix 116
116
C
431 436Right-handed 310
Helix 117
117
C
445 458Right-handed alpha
Helix 118
118
C
478 486Right-handed 310
Helix 119
119
C
493 506Right-handed alpha
Helix 120
120
C
511 513Right-handed 310
Helix 121
121
C
523 527Right-handed 310
Helix 122
122
C
528 536Right-handed alpha
Helix 123
123
C
570 583Right-handed alpha
Helix 124
124
C
583 588Right-handed alpha
Helix 125
125
C
603 617Right-handed alpha
Helix 126
126
C
644 650Right-handed alpha
Helix 127
127
C
662 679Right-handed alpha
Helix 128
128
C
705 712Right-handed alpha
Helix 129
129
C
734 748Right-handed alpha
Helix 130
130
C
760 778Right-handed alpha
Helix 131
131
C
786 792Right-handed alpha
Helix 132
132
C
805 810Right-handed alpha
Helix 133
133
C
811 815Right-handed 310
Helix 134
134
C
833 841Right-handed alpha
Helix 135
135
C
844 859Right-handed alpha
Helix 136
136
C
863 874Right-handed alpha
Helix 137
137
D
9 26Right-handed alpha
Helix 138
138
D
29 43Right-handed alpha
Helix 139
139
D
64 68Right-handed 310
Helix 140
140
D
74 99Right-handed alpha
Helix 141
141
D
107 124Right-handed alpha
Helix 142
142
D
140 142Right-handed 310
Helix 143
143
D
143 154Right-handed alpha
Helix 144
144
D
158 163Right-handed alpha
Helix 145
145
D
195 214Right-handed alpha
Helix 146
146
D
231 234Right-handed 310
Helix 147
147
D
235 240Right-handed alpha
Helix 148
148
D
241 248Right-handed alpha
Helix 149
149
D
273 285Right-handed alpha
Helix 150
150
D
298 305Right-handed alpha
Helix 151
151
D
308 317Right-handed alpha
Helix 152
152
D
318 323Right-handed alpha
Helix 153
153
D
329 337Right-handed alpha
Helix 154
154
D
338 340Right-handed 310
Helix 155
155
D
341 348Right-handed alpha
Helix 156
156
D
352 358Right-handed alpha
Helix 157
157
D
361 364Right-handed 310
Helix 158
158
D
365 379Right-handed alpha
Helix 159
159
D
405 412Right-handed 310
Helix 160
160
D
414 424Right-handed alpha
Helix 161
161
D
431 436Right-handed 310
Helix 162
162
D
445 458Right-handed alpha
Helix 163
163
D
478 486Right-handed 310
Helix 164
164
D
493 506Right-handed alpha
Helix 165
165
D
511 513Right-handed 310
Helix 166
166
D
523 527Right-handed 310
Helix 167
167
D
528 536Right-handed alpha
Helix 168
168
D
570 583Right-handed alpha
Helix 169
169
D
583 588Right-handed alpha
Helix 170
170
D
603 617Right-handed alpha
Helix 171
171
D
644 650Right-handed alpha
Helix 172
172
D
662 679Right-handed alpha
Helix 173
173
D
705 712Right-handed alpha
Helix 174
174
D
734 750Right-handed alpha
Helix 175
175
D
760 778Right-handed alpha
Helix 176
176
D
786 792Right-handed alpha
Helix 177
177
D
805 810Right-handed alpha
Helix 178
178
D
811 815Right-handed 310
Helix 179
179
D
833 841Right-handed alpha
Helix 180
180
D
844 859Right-handed alpha
Helix 181
181
D
863 874Right-handed alpha
Helix 182
182
E
125 136Right-handed alpha
Helix 183
183
E
152 165Right-handed alpha
Helix 184
184
F
125 136Right-handed alpha
Helix 185
185
F
152 165Right-handed alpha
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There are 16 sheets in PDB entry 4QOY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 138first strand
Strand 2
A
224 229parallel
Strand 3
A
253 259parallel
Strand 4
A
384 389parallel
Strand 5
A
288 292parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
565 566first strand
Strand 2
A
515 519parallel
Strand 3
A
593 599parallel
Strand 4
A
622 626parallel
Strand 5
A
686 690parallel
Strand 6
A
655 658parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 538first strand
Strand 2
A
558 559parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
713 719first strand
Strand 2
A
751 758anti-parallel
Strand 3
A
724 730parallel
Strand 4
A
797 800parallel
Strand 5
A
820 823parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 138first strand
Strand 2
B
224 229parallel
Strand 3
B
253 259parallel
Strand 4
B
384 389parallel
Strand 5
B
288 292parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
565 566first strand
Strand 2
B
515 519parallel
Strand 3
B
593 599parallel
Strand 4
B
622 626parallel
Strand 5
B
686 690parallel
Strand 6
B
655 658parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
537 538first strand
Strand 2
B
558 559parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
713 719first strand
Strand 2
B
751 758anti-parallel
Strand 3
B
724 730parallel
Strand 4
B
797 800parallel
Strand 5
B
820 823parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
136 138first strand
Strand 2
C
224 229parallel
Strand 3
C
253 259parallel
Strand 4
C
384 389parallel
Strand 5
C
288 292parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
565 566first strand
Strand 2
C
515 519parallel
Strand 3
C
593 599parallel
Strand 4
C
622 626parallel
Strand 5
C
686 690parallel
Strand 6
C
655 658parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
537 538first strand
Strand 2
C
558 559parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
713 719first strand
Strand 2
C
751 758anti-parallel
Strand 3
C
724 730parallel
Strand 4
C
797 800parallel
Strand 5
C
820 823parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
136 138first strand
Strand 2
D
224 229parallel
Strand 3
D
253 259parallel
Strand 4
D
384 389parallel
Strand 5
D
288 292parallel
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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
565 566first strand
Strand 2
D
515 519parallel
Strand 3
D
593 599parallel
Strand 4
D
622 626parallel
Strand 5
D
686 690parallel
Strand 6
D
655 658parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
537 538first strand
Strand 2
D
558 559parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
713 719first strand
Strand 2
D
751 758anti-parallel
Strand 3
D
724 730parallel
Strand 4
D
797 800parallel
Strand 5
D
820 823parallel
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