Analysis of interatomic Contacts of Structural Units in PDB entry:
4QUV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4QUV entry

There are 2 chains in PDB entry 4QUV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 23TYR 427
B
 SER 24TYR 427
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 4QUV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 46Right-handed alpha
Helix 2
2
A
55 64Right-handed alpha
Helix 3
3
A
70 91Right-handed alpha
Helix 4
4
A
112 130Right-handed alpha
Helix 5
5
A
136 141Right-handed alpha
Helix 6
6
A
141 164Right-handed alpha
Helix 7
7
A
179 184Right-handed alpha
Helix 8
8
A
196 225Right-handed alpha
Helix 9
9
A
228 248Right-handed alpha
Helix 10
10
A
249 254Right-handed 310
Helix 11
11
A
255 260Right-handed alpha
Helix 12
12
A
264 273Right-handed alpha
Helix 13
13
A
273 280Right-handed alpha
Helix 14
14
A
280 288Right-handed alpha
Helix 15
15
A
294 324Right-handed alpha
Helix 16
16
A
350 355Right-handed alpha
Helix 17
17
A
357 372Right-handed alpha
Helix 18
18
A
373 375Right-handed 310
Helix 19
19
A
379 381Right-handed 310
Helix 20
20
A
382 418Right-handed alpha
Helix 21
21
B
25 45Right-handed alpha
Helix 22
22
B
56 64Right-handed alpha
Helix 23
23
B
70 91Right-handed alpha
Helix 24
24
B
112 130Right-handed alpha
Helix 25
25
B
136 141Right-handed alpha
Helix 26
26
B
141 161Right-handed alpha
Helix 27
27
B
196 225Right-handed alpha
Helix 28
28
B
228 248Right-handed alpha
Helix 29
29
B
249 254Right-handed 310
Helix 30
30
B
255 260Right-handed alpha
Helix 31
31
B
264 273Right-handed alpha
Helix 32
32
B
273 280Right-handed alpha
Helix 33
33
B
280 288Right-handed alpha
Helix 34
34
B
294 324Right-handed alpha
Helix 35
35
B
350 355Right-handed alpha
Helix 36
36
B
357 372Right-handed alpha
Helix 37
37
B
373 375Right-handed 310
Helix 38
38
B
379 381Right-handed 310
Helix 39
39
B
382 408Right-handed alpha
Helix 40
40
B
408 418Right-handed alpha
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There are 7 sheets in PDB entry 4QUV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 98first strand
Strand 2
A
107 110anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 191first strand
Strand 2
A
194 195anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 340first strand
Strand 2
A
344 347anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 98first strand
Strand 2
B
107 110anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
190 191first strand
Strand 2
B
194 195anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
329 330first strand
Strand 2
B
333 334anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
337 340first strand
Strand 2
B
344 347anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il