Analysis of interatomic Contacts of Structural Units in PDB entry:
4R0B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4R0B entry

There is 1 chain in PDB entry 4R0B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 8CYS 160
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 4R0B. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
11 16Right-handed 310
Helix 2
2
A
28 32Right-handed 310
Helix 3
3
A
129 141Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4R0B.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
17 18first strand
Strand 2
A
42 48anti-parallel
Strand 3
A
54 61anti-parallel
Strand 4
A
66 75anti-parallel
Strand 5
A
81 86anti-parallel
Strand 6
A
89 97anti-parallel
Strand 7
A
102 109anti-parallel
Strand 8
A
116 123anti-parallel
Strand 9
A
20 26anti-parallel
Strand 10
A
149 152anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il