Analysis of interatomic Contacts of Structural Units in PDB entry:
4R16


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4R16 entry

There are 2 chains in PDB entry 4R16 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1VAL 418
B
 MSE 1VAL 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 4R16. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 21Right-handed alpha
Helix 2
2
A
32 41Right-handed alpha
Helix 3
3
A
50 61Right-handed alpha
Helix 4
4
A
69 74Right-handed 310
Helix 5
5
A
94 108Right-handed alpha
Helix 6
6
A
123 137Right-handed alpha
Helix 7
7
A
157 165Right-handed alpha
Helix 8
8
A
173 185Right-handed alpha
Helix 9
9
A
197 229Right-handed alpha
Helix 10
10
A
231 240Right-handed alpha
Helix 11
11
A
261 268Right-handed alpha
Helix 12
12
A
275 286Right-handed alpha
Helix 13
13
A
286 302Right-handed alpha
Helix 14
14
A
305 308Right-handed 310
Helix 15
15
A
328 338Right-handed alpha
Helix 16
16
A
357 363Right-handed alpha
Helix 17
17
A
374 380Right-handed 310
Helix 18
18
A
381 388Right-handed alpha
Helix 19
19
B
11 21Right-handed alpha
Helix 20
20
B
32 40Right-handed alpha
Helix 21
21
B
50 61Right-handed alpha
Helix 22
22
B
69 74Right-handed 310
Helix 23
23
B
94 108Right-handed alpha
Helix 24
24
B
123 137Right-handed alpha
Helix 25
25
B
157 165Right-handed alpha
Helix 26
26
B
173 185Right-handed alpha
Helix 27
27
B
197 229Right-handed alpha
Helix 28
28
B
231 240Right-handed alpha
Helix 29
29
B
261 268Right-handed alpha
Helix 30
30
B
275 286Right-handed alpha
Helix 31
31
B
286 302Right-handed alpha
Helix 32
32
B
305 308Right-handed 310
Helix 33
33
B
328 338Right-handed alpha
Helix 34
34
B
339 341Right-handed 310
Helix 35
35
B
357 363Right-handed alpha
Helix 36
36
B
374 380Right-handed 310
Helix 37
37
B
381 386Right-handed alpha
Helix 38
38
B
387 389Right-handed 310
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There are 6 sheets in PDB entry 4R16. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 67first strand
Strand 2
A
25 29parallel
Strand 3
A
2 6parallel
Strand 4
A
78 81parallel
Strand 5
A
113 116parallel
Strand 6
A
145 148parallel
Strand 7
A
167 171anti-parallel
Strand 8
A
192 196parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
91 92anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
343 347first strand
Strand 2
A
310 314parallel
Strand 3
A
367 370parallel
Strand 4
A
393 396parallel
Strand 5
A
409 412parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 67first strand
Strand 2
B
25 29parallel
Strand 3
B
2 6parallel
Strand 4
B
78 81parallel
Strand 5
B
113 116parallel
Strand 6
B
145 148parallel
Strand 7
B
167 171anti-parallel
Strand 8
B
192 196parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 88first strand
Strand 2
B
91 92anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
343 347first strand
Strand 2
B
310 314parallel
Strand 3
B
367 370parallel
Strand 4
B
393 396parallel
Strand 5
B
409 412parallel
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