Analysis of interatomic Contacts of Structural Units in PDB entry:
4R29


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4R29 entry

There are 4 chains in PDB entry 4R29 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 21LEU 220
B
 LYS 17LYS 219
C
 HIS 21GLU 224
D
 HIS 21LEU 220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 4R29. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 27Right-handed alpha
Helix 2
2
A
31 36Right-handed 310
Helix 3
3
A
42 45Right-handed 310
Helix 4
4
A
62 77Right-handed alpha
Helix 5
5
A
88 93Right-handed 310
Helix 6
6
A
94 104Right-handed alpha
Helix 7
7
A
119 126Right-handed alpha
Helix 8
8
A
155 182Right-handed alpha
Helix 9
9
A
185 202Right-handed alpha
Helix 10
10
A
205 220Right-handed alpha
Helix 11
11
B
18 27Right-handed alpha
Helix 12
12
B
31 37Right-handed 310
Helix 13
13
B
42 45Right-handed 310
Helix 14
14
B
62 77Right-handed alpha
Helix 15
15
B
88 93Right-handed 310
Helix 16
16
B
94 104Right-handed alpha
Helix 17
17
B
119 126Right-handed alpha
Helix 18
18
B
156 182Right-handed alpha
Helix 19
19
B
185 202Right-handed alpha
Helix 20
20
B
205 219Right-handed alpha
Helix 21
21
C
22 27Right-handed alpha
Helix 22
22
C
32 37Right-handed alpha
Helix 23
23
C
42 45Right-handed 310
Helix 24
24
C
62 77Right-handed alpha
Helix 25
25
C
88 93Right-handed 310
Helix 26
26
C
94 104Right-handed alpha
Helix 27
27
C
119 126Right-handed alpha
Helix 28
28
C
154 179Right-handed alpha
Helix 29
29
C
185 202Right-handed alpha
Helix 30
30
C
205 221Right-handed alpha
Helix 31
31
D
22 27Right-handed alpha
Helix 32
32
D
32 37Right-handed alpha
Helix 33
33
D
42 45Right-handed 310
Helix 34
34
D
62 77Right-handed alpha
Helix 35
35
D
88 93Right-handed 310
Helix 36
36
D
94 104Right-handed alpha
Helix 37
37
D
119 126Right-handed alpha
Helix 38
38
D
154 182Right-handed alpha
Helix 39
39
D
185 202Right-handed alpha
Helix 40
40
D
205 218Right-handed alpha
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There are 8 sheets in PDB entry 4R29. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 48first strand
Strand 2
A
56 57anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 114first strand
Strand 2
A
145 151anti-parallel
Strand 3
A
131 137anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 48first strand
Strand 2
B
56 57anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 114first strand
Strand 2
B
145 151anti-parallel
Strand 3
B
131 137anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 48first strand
Strand 2
C
56 57anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
109 114first strand
Strand 2
C
145 151anti-parallel
Strand 3
C
131 137anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
47 48first strand
Strand 2
D
56 57anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
109 114first strand
Strand 2
D
145 151anti-parallel
Strand 3
D
131 137anti-parallel
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