Analysis of interatomic Contacts of Structural Units in PDB entry:
4R34


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4R34 entry

There are 2 chains in PDB entry 4R34 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 15ARG 398
B
 SER 10ALA 393
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 4R34. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 30Right-handed alpha
Helix 2
2
A
33 40Right-handed alpha
Helix 3
3
A
49 60Right-handed alpha
Helix 4
4
A
64 76Right-handed alpha
Helix 5
5
A
117 131Right-handed alpha
Helix 6
6
A
146 168Right-handed alpha
Helix 7
7
A
180 189Right-handed alpha
Helix 8
8
A
207 216Right-handed alpha
Helix 9
9
A
222 225Right-handed 310
Helix 10
10
A
226 232Right-handed alpha
Helix 11
11
A
232 240Right-handed alpha
Helix 12
12
A
256 274Right-handed alpha
Helix 13
13
A
298 313Right-handed alpha
Helix 14
14
A
325 333Right-handed alpha
Helix 15
15
A
334 336Right-handed 310
Helix 16
16
A
371 382Right-handed alpha
Helix 17
17
A
393 397Right-handed 310
Helix 18
18
B
21 30Right-handed alpha
Helix 19
19
B
33 39Right-handed alpha
Helix 20
20
B
49 60Right-handed alpha
Helix 21
21
B
64 77Right-handed alpha
Helix 22
22
B
117 131Right-handed alpha
Helix 23
23
B
146 168Right-handed alpha
Helix 24
24
B
180 189Right-handed alpha
Helix 25
25
B
207 216Right-handed alpha
Helix 26
26
B
222 225Right-handed 310
Helix 27
27
B
226 232Right-handed alpha
Helix 28
28
B
232 240Right-handed alpha
Helix 29
29
B
256 274Right-handed alpha
Helix 30
30
B
298 313Right-handed alpha
Helix 31
31
B
325 333Right-handed alpha
Helix 32
32
B
334 336Right-handed 310
Helix 33
33
B
371 382Right-handed alpha
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There are 4 sheets in PDB entry 4R34. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 281first strand
Strand 2
A
318 321parallel
Strand 3
A
338 340parallel
Strand 4
A
83 85parallel
Strand 5
A
386 387parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 90first strand
Strand 2
A
136 140parallel
Strand 3
A
171 175parallel
Strand 4
A
197 204parallel
Strand 5
A
244 249parallel
Strand 6
A
277 278parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 85first strand
Strand 2
B
338 340parallel
Strand 3
B
318 321parallel
Strand 4
B
280 281parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 90first strand
Strand 2
B
136 140parallel
Strand 3
B
171 175parallel
Strand 4
B
197 200parallel
Strand 5
B
244 246parallel
Strand 6
B
277 278parallel
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