Analysis of interatomic Contacts of Structural Units in PDB entry:
4R58


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4R58 entry

There are 4 chains in PDB entry 4R58 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 1LYS 220
B
 GLU 1LYS 220
C
 GLU 1LYS 220
D
 GLU 1LYS 220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 4R58. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 13Right-handed alpha
Helix 2
2
A
15 27Right-handed alpha
Helix 3
3
A
36 41Right-handed alpha
Helix 4
4
A
58 62Right-handed 310
Helix 5
5
A
78 82Right-handed 310
Helix 6
6
A
100 104Right-handed 310
Helix 7
7
A
122 126Right-handed 310
Helix 8
8
A
144 148Right-handed 310
Helix 9
9
A
166 170Right-handed 310
Helix 10
10
A
188 192Right-handed 310
Helix 11
11
A
210 216Right-handed 310
Helix 12
12
B
9 13Right-handed alpha
Helix 13
13
B
15 26Right-handed alpha
Helix 14
14
B
36 42Right-handed alpha
Helix 15
15
B
58 62Right-handed 310
Helix 16
16
B
78 82Right-handed 310
Helix 17
17
B
100 104Right-handed 310
Helix 18
18
B
122 126Right-handed 310
Helix 19
19
B
144 148Right-handed 310
Helix 20
20
B
166 170Right-handed 310
Helix 21
21
B
188 192Right-handed 310
Helix 22
22
B
210 214Right-handed 310
Helix 23
23
C
9 13Right-handed alpha
Helix 24
24
C
15 26Right-handed alpha
Helix 25
25
C
36 41Right-handed alpha
Helix 26
26
C
58 62Right-handed 310
Helix 27
27
C
78 82Right-handed 310
Helix 28
28
C
100 104Right-handed 310
Helix 29
29
C
122 126Right-handed 310
Helix 30
30
C
144 148Right-handed 310
Helix 31
31
C
166 170Right-handed 310
Helix 32
32
C
188 192Right-handed 310
Helix 33
33
C
210 216Right-handed 310
Helix 34
34
D
9 13Right-handed alpha
Helix 35
35
D
15 27Right-handed alpha
Helix 36
36
D
36 41Right-handed alpha
Helix 37
37
D
58 62Right-handed 310
Helix 38
38
D
78 82Right-handed 310
Helix 39
39
D
100 104Right-handed 310
Helix 40
40
D
122 126Right-handed 310
Helix 41
41
D
144 148Right-handed 310
Helix 42
42
D
166 170Right-handed 310
Helix 43
43
D
188 192Right-handed 310
Helix 44
44
D
210 214Right-handed 310
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There are 8 sheets in PDB entry 4R58. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 8first strand
Strand 2
A
34 35anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 47first strand
Strand 2
A
67 69parallel
Strand 3
A
89 91parallel
Strand 4
A
111 113parallel
Strand 5
A
133 135parallel
Strand 6
A
155 157parallel
Strand 7
A
177 179parallel
Strand 8
A
199 201parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 8first strand
Strand 2
B
34 35anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 47first strand
Strand 2
B
67 69parallel
Strand 3
B
89 91parallel
Strand 4
B
111 113parallel
Strand 5
B
133 135parallel
Strand 6
B
155 157parallel
Strand 7
B
177 179parallel
Strand 8
B
199 201parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
7 8first strand
Strand 2
C
34 35anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
45 47first strand
Strand 2
C
67 69parallel
Strand 3
C
89 91parallel
Strand 4
C
111 113parallel
Strand 5
C
133 135parallel
Strand 6
C
155 157parallel
Strand 7
C
177 179parallel
Strand 8
C
199 201parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
7 8first strand
Strand 2
D
34 35anti-parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
45 47first strand
Strand 2
D
67 69parallel
Strand 3
D
89 91parallel
Strand 4
D
111 113parallel
Strand 5
D
133 135parallel
Strand 6
D
155 157parallel
Strand 7
D
177 179parallel
Strand 8
D
199 201parallel
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