Analysis of interatomic Contacts of Structural Units in PDB entry:
4R5G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4R5G entry

There are 2 chains in PDB entry 4R5G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 378LYS 597
B
 MET 378SER 595
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 4R5G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
447 451Right-handed 310
Helix 2
2
A
508 522Right-handed alpha
Helix 3
3
A
522 552Right-handed alpha
Helix 4
4
A
560 578Right-handed alpha
Helix 5
5
A
580 594Right-handed alpha
Helix 6
6
B
404 406Right-handed 310
Helix 7
7
B
508 523Right-handed alpha
Helix 8
8
B
523 551Right-handed alpha
Helix 9
9
B
562 578Right-handed alpha
Helix 10
10
B
582 594Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4R5G. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
407 412first strand
Strand 2
A
399 403anti-parallel
Strand 3
A
436 441anti-parallel
Strand 4
A
455 459anti-parallel
Strand 5
B
452 459anti-parallel
Strand 6
B
436 442anti-parallel
Strand 7
B
399 403anti-parallel
Strand 8
B
407 412anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
420 426first strand
Strand 2
A
472 478anti-parallel
Strand 3
A
484 490anti-parallel
Strand 4
A
497 501anti-parallel
Strand 5
B
496 502anti-parallel
Strand 6
B
483 490anti-parallel
Strand 7
B
472 478anti-parallel
Strand 8
B
420 426anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il