Analysis of interatomic Contacts of Structural Units in PDB entry:
4R5Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4R5Z entry

There are 4 chains in PDB entry 4R5Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 1GLN 353
B
 VAL 1GLN 353
C
 VAL 1GLN 353
D
 VAL 1GLN 353
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 4R5Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 10Right-handed 310
Helix 2
2
A
37 49Right-handed alpha
Helix 3
3
A
59 71Right-handed alpha
Helix 4
4
A
75 77Right-handed 310
Helix 5
5
A
83 97Right-handed alpha
Helix 6
6
A
112 120Right-handed alpha
Helix 7
7
A
135 142Right-handed alpha
Helix 8
8
A
164 175Right-handed alpha
Helix 9
9
A
187 191Right-handed 310
Helix 10
10
A
198 206Right-handed alpha
Helix 11
11
A
232 243Right-handed alpha
Helix 12
12
A
249 262Right-handed alpha
Helix 13
13
A
262 288Right-handed alpha
Helix 14
14
A
303 305Right-handed 310
Helix 15
15
A
306 317Right-handed alpha
Helix 16
16
A
335 353Right-handed alpha
Helix 17
17
B
6 10Right-handed 310
Helix 18
18
B
37 49Right-handed alpha
Helix 19
19
B
59 71Right-handed alpha
Helix 20
20
B
75 77Right-handed 310
Helix 21
21
B
83 97Right-handed alpha
Helix 22
22
B
112 120Right-handed alpha
Helix 23
23
B
135 142Right-handed alpha
Helix 24
24
B
164 175Right-handed alpha
Helix 25
25
B
187 191Right-handed 310
Helix 26
26
B
198 206Right-handed alpha
Helix 27
27
B
232 243Right-handed alpha
Helix 28
28
B
249 262Right-handed alpha
Helix 29
29
B
262 287Right-handed alpha
Helix 30
30
B
303 305Right-handed 310
Helix 31
31
B
306 317Right-handed alpha
Helix 32
32
B
335 352Right-handed alpha
Helix 33
33
C
6 10Right-handed 310
Helix 34
34
C
37 49Right-handed alpha
Helix 35
35
C
59 71Right-handed alpha
Helix 36
36
C
75 77Right-handed 310
Helix 37
37
C
83 97Right-handed alpha
Helix 38
38
C
112 120Right-handed alpha
Helix 39
39
C
135 142Right-handed alpha
Helix 40
40
C
164 175Right-handed alpha
Helix 41
41
C
187 191Right-handed 310
Helix 42
42
C
198 206Right-handed alpha
Helix 43
43
C
232 243Right-handed alpha
Helix 44
44
C
249 262Right-handed alpha
Helix 45
45
C
262 269Right-handed alpha
Helix 46
46
C
269 287Right-handed alpha
Helix 47
47
C
303 305Right-handed 310
Helix 48
48
C
306 317Right-handed alpha
Helix 49
49
C
335 352Right-handed alpha
Helix 50
50
D
6 10Right-handed 310
Helix 51
51
D
37 49Right-handed alpha
Helix 52
52
D
59 71Right-handed alpha
Helix 53
53
D
75 77Right-handed 310
Helix 54
54
D
84 97Right-handed alpha
Helix 55
55
D
112 120Right-handed alpha
Helix 56
56
D
135 142Right-handed alpha
Helix 57
57
D
164 175Right-handed alpha
Helix 58
58
D
187 191Right-handed 310
Helix 59
59
D
198 206Right-handed alpha
Helix 60
60
D
232 243Right-handed alpha
Helix 61
61
D
249 262Right-handed alpha
Helix 62
62
D
262 287Right-handed alpha
Helix 63
63
D
303 305Right-handed 310
Helix 64
64
D
306 317Right-handed alpha
Helix 65
65
D
335 353Right-handed alpha
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There are 10 sheets in PDB entry 4R5Z. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 26first strand
Strand 2
A
319 320parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 82first strand
Strand 2
A
227 230anti-parallel
Strand 3
A
209 214anti-parallel
Strand 4
A
180 184parallel
Strand 5
A
147 153parallel
Strand 6
A
102 107parallel
Strand 7
A
123 128parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 301first strand
Strand 2
A
328 332anti-parallel
Strand 3
A
322 324anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 26first strand
Strand 2
B
319 320parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 82first strand
Strand 2
B
227 230anti-parallel
Strand 3
B
209 214anti-parallel
Strand 4
B
180 184parallel
Strand 5
B
147 153parallel
Strand 6
B
102 107parallel
Strand 7
B
123 128parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
298 301first strand
Strand 2
B
328 332anti-parallel
Strand 3
B
322 324anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
25 27first strand
Strand 2
C
319 324parallel
Strand 3
C
328 332anti-parallel
Strand 4
C
298 301anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
79 82first strand
Strand 2
C
227 231anti-parallel
Strand 3
C
209 214anti-parallel
Strand 4
C
180 184parallel
Strand 5
C
147 153parallel
Strand 6
C
102 107parallel
Strand 7
C
123 128parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
25 27first strand
Strand 2
D
319 324parallel
Strand 3
D
328 332anti-parallel
Strand 4
D
298 301anti-parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
79 82first strand
Strand 2
D
227 230anti-parallel
Strand 3
D
209 214anti-parallel
Strand 4
D
180 184parallel
Strand 5
D
147 153parallel
Strand 6
D
102 107parallel
Strand 7
D
123 128parallel
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