Analysis of interatomic Contacts of Structural Units in PDB entry:
4R69


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4R69 entry

There are 4 chains in PDB entry 4R69 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1PHE 331
B
 ALA 1PHE 331
C
 ALA 1PHE 331
D
 ALA 1PHE 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 4R69. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 7Right-handed alpha
Helix 2
2
A
28 41Right-handed alpha
Helix 3
3
A
53 67Right-handed alpha
Helix 4
4
A
68 71Right-handed 310
Helix 5
5
A
81 86Right-handed 310
Helix 6
6
A
107 127Right-handed alpha
Helix 7
7
A
138 151Right-handed alpha
Helix 8
8
A
153 155Right-handed 310
Helix 9
9
A
162 178Right-handed alpha
Helix 10
10
A
210 214Right-handed alpha
Helix 11
11
A
226 244Right-handed alpha
Helix 12
12
A
248 265Right-handed alpha
Helix 13
13
A
308 327Right-handed alpha
Helix 14
14
B
2 7Right-handed alpha
Helix 15
15
B
28 41Right-handed alpha
Helix 16
16
B
53 67Right-handed alpha
Helix 17
17
B
68 71Right-handed 310
Helix 18
18
B
81 86Right-handed 310
Helix 19
19
B
107 127Right-handed alpha
Helix 20
20
B
138 151Right-handed alpha
Helix 21
21
B
153 155Right-handed 310
Helix 22
22
B
162 178Right-handed alpha
Helix 23
23
B
210 214Right-handed alpha
Helix 24
24
B
226 245Right-handed alpha
Helix 25
25
B
248 264Right-handed alpha
Helix 26
26
B
308 327Right-handed alpha
Helix 27
27
C
2 7Right-handed alpha
Helix 28
28
C
28 41Right-handed alpha
Helix 29
29
C
53 67Right-handed alpha
Helix 30
30
C
68 71Right-handed 310
Helix 31
31
C
81 86Right-handed 310
Helix 32
32
C
104 127Right-handed alpha
Helix 33
33
C
138 151Right-handed alpha
Helix 34
34
C
153 155Right-handed 310
Helix 35
35
C
162 178Right-handed alpha
Helix 36
36
C
210 214Right-handed alpha
Helix 37
37
C
226 245Right-handed alpha
Helix 38
38
C
248 265Right-handed alpha
Helix 39
39
C
308 327Right-handed alpha
Helix 40
40
D
2 7Right-handed alpha
Helix 41
41
D
28 41Right-handed alpha
Helix 42
42
D
53 67Right-handed alpha
Helix 43
43
D
68 71Right-handed 310
Helix 44
44
D
81 86Right-handed 310
Helix 45
45
D
109 127Right-handed alpha
Helix 46
46
D
138 151Right-handed alpha
Helix 47
47
D
153 155Right-handed 310
Helix 48
48
D
162 178Right-handed alpha
Helix 49
49
D
210 214Right-handed alpha
Helix 50
50
D
226 245Right-handed alpha
Helix 51
51
D
248 265Right-handed alpha
Helix 52
52
D
308 327Right-handed alpha
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There are 14 sheets in PDB entry 4R69. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 10first strand
Strand 2
D
298 303anti-parallel
Strand 3
D
287 295anti-parallel
Strand 4
D
268 275anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 78first strand
Strand 2
A
46 50parallel
Strand 3
A
21 25parallel
Strand 4
A
90 93parallel
Strand 5
A
131 134parallel
Strand 6
A
157 159parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 185first strand
Strand 2
A
204 205anti-parallel
Strand 3
A
208 209anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 190first strand
Strand 2
A
196 197anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 275first strand
Strand 2
A
287 295anti-parallel
Strand 3
A
298 303anti-parallel
Strand 4
D
8 10anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 10first strand
Strand 2
C
298 303anti-parallel
Strand 3
C
287 295anti-parallel
Strand 4
C
268 275anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 78first strand
Strand 2
B
46 50parallel
Strand 3
B
21 25parallel
Strand 4
B
90 93parallel
Strand 5
B
131 134parallel
Strand 6
B
157 159parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
184 190first strand
Strand 2
B
196 205anti-parallel
Strand 3
B
208 209anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
268 275first strand
Strand 2
B
287 295anti-parallel
Strand 3
B
298 303anti-parallel
Strand 4
C
8 10anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
75 78first strand
Strand 2
C
46 50parallel
Strand 3
C
21 25parallel
Strand 4
C
90 93parallel
Strand 5
C
131 134parallel
Strand 6
C
157 159parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
184 185first strand
Strand 2
C
204 205anti-parallel
Strand 3
C
208 209anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
189 190first strand
Strand 2
C
196 197anti-parallel
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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
75 78first strand
Strand 2
D
46 50parallel
Strand 3
D
21 25parallel
Strand 4
D
90 93parallel
Strand 5
D
131 134parallel
Strand 6
D
157 159parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
184 190first strand
Strand 2
D
196 205anti-parallel
Strand 3
D
208 209anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il