Analysis of interatomic Contacts of Structural Units in PDB entry:
4R6F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4R6F entry

There is 1 chain in PDB entry 4R6F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1GLN 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 7 helices in PDB entry 4R6F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 12Right-handed alpha
Helix 2
2
A
14 26Right-handed alpha
Helix 3
3
A
35 41Right-handed alpha
Helix 4
4
A
57 61Right-handed 310
Helix 5
5
A
77 81Right-handed 310
Helix 6
6
A
168 173Right-handed 310
Helix 7
7
A
248 253Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 4R6F. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
33 34anti-parallel
Back to list of sheets
Back to top of page

There are 12 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 46first strand
Strand 2
A
66 68parallel
Strand 3
A
88 90parallel
Strand 4
A
112 114parallel
Strand 5
A
136 138parallel
Strand 6
A
160 162parallel
Strand 7
A
192 194parallel
Strand 8
A
216 218parallel
Strand 9
A
240 242parallel
Strand 10
A
272 274parallel
Strand 11
A
296 298parallel
Strand 12
A
320 322parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il