Analysis of interatomic Contacts of Structural Units in PDB entry:
4R6K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4R6K entry

There is 1 chain in PDB entry 4R6K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 11ASN 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 4R6K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 40Right-handed alpha
Helix 2
2
A
51 65Right-handed alpha
Helix 3
3
A
75 85Right-handed alpha
Helix 4
4
A
91 97Right-handed alpha
Helix 5
5
A
106 112Right-handed 310
Helix 6
6
A
135 142Right-handed alpha
Helix 7
7
A
151 167Right-handed alpha
Helix 8
8
A
176 188Right-handed alpha
Helix 9
9
A
204 221Right-handed alpha
Helix 10
10
A
226 232Right-handed alpha
Helix 11
11
A
235 239Right-handed 310
Helix 12
12
A
254 263Right-handed alpha
Helix 13
13
A
297 311Right-handed alpha
Helix 14
14
A
311 319Right-handed alpha
Helix 15
15
A
327 335Right-handed alpha
Helix 16
16
A
336 338Right-handed 310
Helix 17
17
A
339 353Right-handed alpha
Helix 18
18
A
366 383Right-handed alpha
Helix 19
19
A
387 405Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 4R6K. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 50first strand
Strand 2
A
13 20parallel
Strand 3
A
71 74parallel
Strand 4
A
284 290anti-parallel
Strand 5
A
122 127anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 115first strand
Strand 2
A
118 119anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 252first strand
Strand 2
A
129 134anti-parallel
Strand 3
A
267 270anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il