Analysis of interatomic Contacts of Structural Units in PDB entry:
4R7J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4R7J entry

There is 1 chain in PDB entry 4R7J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0LYS 481
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4R7J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 11Right-handed 310
Helix 2
2
A
53 63Right-handed alpha
Helix 3
3
A
74 87Right-handed alpha
Helix 4
4
A
201 205Right-handed alpha
Helix 5
5
A
226 236Right-handed alpha
Helix 6
6
A
250 264Right-handed alpha
Helix 7
7
A
276 287Right-handed alpha
Helix 8
8
A
302 307Right-handed alpha
Helix 9
9
A
312 325Right-handed alpha
Helix 10
10
A
326 328Right-handed 310
Helix 11
11
A
339 350Right-handed alpha
Helix 12
12
A
357 362Right-handed alpha
Helix 13
13
A
386 391Right-handed alpha
Helix 14
14
A
422 442Right-handed alpha
Helix 15
15
A
445 453Right-handed alpha
Helix 16
16
A
459 467Right-handed alpha
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There are 4 sheets in PDB entry 4R7J. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
455 457anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
A
38 39anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 45first strand
Strand 2
A
66 69parallel
Strand 3
A
219 222parallel
Strand 4
A
240 244parallel
Strand 5
A
268 274parallel
Strand 6
A
290 293parallel
Strand 7
A
331 334parallel
Strand 8
A
353 356parallel
Strand 9
A
43 45parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 373first strand
Strand 2
A
376 382anti-parallel
Strand 3
A
414 418anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il