Analysis of interatomic Contacts of Structural Units in PDB entry:
4R7Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4R7Y entry

There are 2 chains in PDB entry 4R7Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 7MET 1965
B
 GLN 7MET 1965
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 4R7Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 21Right-handed alpha
Helix 2
2
A
28 40Right-handed alpha
Helix 3
3
A
49 56Right-handed alpha
Helix 4
4
A
56 66Right-handed alpha
Helix 5
5
A
66 86Right-handed alpha
Helix 6
6
A
88 93Right-handed alpha
Helix 7
7
A
108 112Right-handed 310
Helix 8
8
A
113 117Right-handed 310
Helix 9
9
A
200 204Right-handed 310
Helix 10
10
A
220 222Right-handed 310
Helix 11
11
A
1262 1275Right-handed alpha
Helix 12
12
A
1277 1287Right-handed alpha
Helix 13
13
A
1293 1306Right-handed alpha
Helix 14
14
A
1333 1343Right-handed alpha
Helix 15
15
A
1746 1751Right-handed alpha
Helix 16
16
A
1760 1764Right-handed 310
Helix 17
17
A
1765 1778Right-handed alpha
Helix 18
18
A
1822 1827Right-handed alpha
Helix 19
19
A
1840 1856Right-handed alpha
Helix 20
20
A
1867 1881Right-handed alpha
Helix 21
21
A
1887 1904Right-handed alpha
Helix 22
22
A
1921 1940Right-handed alpha
Helix 23
23
A
1945 1964Right-handed alpha
Helix 24
24
B
9 21Right-handed alpha
Helix 25
25
B
28 40Right-handed alpha
Helix 26
26
B
49 56Right-handed alpha
Helix 27
27
B
56 66Right-handed alpha
Helix 28
28
B
66 86Right-handed alpha
Helix 29
29
B
88 93Right-handed alpha
Helix 30
30
B
108 112Right-handed 310
Helix 31
31
B
113 117Right-handed 310
Helix 32
32
B
184 187Right-handed 310
Helix 33
33
B
200 204Right-handed 310
Helix 34
34
B
220 222Right-handed 310
Helix 35
35
B
1262 1275Right-handed alpha
Helix 36
36
B
1277 1287Right-handed alpha
Helix 37
37
B
1293 1306Right-handed alpha
Helix 38
38
B
1312 1316Right-handed 310
Helix 39
39
B
1333 1344Right-handed alpha
Helix 40
40
B
1746 1751Right-handed alpha
Helix 41
41
B
1765 1778Right-handed alpha
Helix 42
42
B
1814 1819Right-handed alpha
Helix 43
43
B
1822 1827Right-handed alpha
Helix 44
44
B
1841 1855Right-handed alpha
Helix 45
45
B
1867 1882Right-handed alpha
Helix 46
46
B
1887 1903Right-handed alpha
Helix 47
47
B
1921 1940Right-handed alpha
Helix 48
48
B
1945 1964Right-handed alpha
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There are 12 sheets in PDB entry 4R7Y. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 48first strand
Strand 2
A
97 101parallel
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There are 12 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 139first strand
Strand 2
A
188 198anti-parallel
Strand 3
A
120 130anti-parallel
Strand 4
A
230 240anti-parallel
Strand 5
A
252 264anti-parallel
Strand 6
B
134 139anti-parallel
Strand 7
B
188 198anti-parallel
Strand 8
B
212 218anti-parallel
Strand 9
B
254 264parallel
Strand 10
B
230 240anti-parallel
Strand 11
B
120 130anti-parallel
Strand 12
B
105 107parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
120 130parallel
Strand 3
A
188 198anti-parallel
Strand 4
A
212 218anti-parallel
Strand 5
A
252 264parallel
Strand 6
B
134 139anti-parallel
Strand 7
B
188 198anti-parallel
Strand 8
B
120 130anti-parallel
Strand 9
B
105 107parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 154first strand
Strand 2
A
141 145anti-parallel
Strand 3
A
179 180anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1348 1352first strand
Strand 2
A
1755 1759parallel
Strand 3
A
1797 1802parallel
Strand 4
A
1324 1328parallel
Strand 5
A
1831 1835parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1730 1734first strand
Strand 2
A
1741 1745anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1780 1785first strand
Strand 2
A
1788 1793anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 48first strand
Strand 2
B
97 101parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 154first strand
Strand 2
B
141 145anti-parallel
Strand 3
B
179 182anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1348 1352first strand
Strand 2
B
1755 1759parallel
Strand 3
B
1797 1802parallel
Strand 4
B
1324 1327parallel
Strand 5
B
1831 1834parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1730 1734first strand
Strand 2
B
1741 1745anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1780 1785first strand
Strand 2
B
1788 1793anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il