Analysis of interatomic Contacts of Structural Units in PDB entry:
4REM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4REM entry

There is 1 chain in PDB entry 4REM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1SER 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4REM. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
14 16Right-handed 310
Helix 2
2
A
17 32Right-handed alpha
Helix 3
3
A
43 51Right-handed alpha
Helix 4
4
A
79 87Right-handed alpha
Helix 5
5
A
88 105Right-handed alpha
Helix 6
6
A
118 128Right-handed alpha
Helix 7
7
A
138 146Right-handed 310
Helix 8
8
A
147 158Right-handed alpha
Helix 9
9
A
174 178Right-handed 310
Helix 10
10
A
179 184Right-handed alpha
Helix 11
11
A
185 189Right-handed 310
Helix 12
12
A
190 197Right-handed alpha
Helix 13
13
A
198 203Right-handed alpha
Helix 14
14
A
204 206Right-handed 310
Helix 15
15
A
219 228Right-handed alpha
Helix 16
16
A
253 259Right-handed alpha
Helix 17
17
A
278 293Right-handed alpha
Helix 18
18
A
301 305Right-handed 310
Helix 19
19
A
311 316Right-handed alpha
Helix 20
20
A
327 333Right-handed alpha
Helix 21
21
A
345 354Right-handed alpha
Helix 22
22
A
367 378Right-handed alpha
Helix 23
23
A
391 404Right-handed alpha
Helix 24
24
A
405 407Right-handed 310
Helix 25
25
A
408 426Right-handed alpha
Helix 26
26
A
430 446Right-handed alpha
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There are 2 sheets in PDB entry 4REM. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
59 64first strand
Strand 2
A
36 42parallel
Strand 3
A
6 10parallel
Strand 4
A
110 114parallel
Strand 5
A
131 135parallel
Strand 6
A
208 211parallel
Strand 7
A
233 235parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
320 323first strand
Strand 2
A
296 299parallel
Strand 3
A
266 270parallel
Strand 4
A
337 342parallel
Strand 5
A
359 361parallel
Strand 6
A
382 384parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il