Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 4RFX entry
There are 5 chains in PDB entry 4RFX
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
MET 432 | GLN 531 |
B
|
GLU 434 | GLN 531 |
C
|
GLU 431 | GLN 531 |
D
|
VAL 433 | GLU 532 |
E
|
LEU 436 | GLN 530 |
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There are 5
helices in PDB entry 4RFX. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
1 | A
| 434 |
531 | Right-handed alpha |
| Helix 2 |
2 | B
| 435 |
531 | Right-handed alpha |
| Helix 3 |
3 | C
| 432 |
531 | Right-handed alpha |
| Helix 4 |
4 | D
| 434 |
532 | Right-handed alpha |
| Helix 5 |
5 | E
| 437 |
530 | Right-handed alpha |
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There are no sheets in PDB entry
4RFX
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il