Analysis of interatomic Contacts of Structural Units in PDB entry:
4RH6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RH6 entry

There are 3 chains in PDB entry 4RH6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 38LYS 226
B
 SER 38LYS 226
C
 SER 38LYS 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 4RH6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 46Right-handed alpha
Helix 2
2
A
85 90Right-handed alpha
Helix 3
3
A
159 175Right-handed alpha
Helix 4
4
A
205 210Right-handed alpha
Helix 5
5
B
39 46Right-handed alpha
Helix 6
6
B
85 90Right-handed alpha
Helix 7
7
B
159 175Right-handed alpha
Helix 8
8
B
205 210Right-handed alpha
Helix 9
9
C
39 46Right-handed alpha
Helix 10
10
C
85 90Right-handed alpha
Helix 11
11
C
159 175Right-handed alpha
Helix 12
12
C
205 210Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 4RH6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 116first strand
Strand 2
A
76 82parallel
Strand 3
A
66 73anti-parallel
Strand 4
A
51 63anti-parallel
Strand 5
A
93 102anti-parallel
Strand 6
A
119 121anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 149first strand
Strand 2
A
135 139anti-parallel
Strand 3
A
218 225parallel
Strand 4
A
184 190anti-parallel
Strand 5
A
195 199anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 158first strand
Strand 2
A
212 214anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 116first strand
Strand 2
B
76 82parallel
Strand 3
B
66 73anti-parallel
Strand 4
B
51 63anti-parallel
Strand 5
B
93 102anti-parallel
Strand 6
B
119 121anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 149first strand
Strand 2
B
135 139anti-parallel
Strand 3
B
218 226parallel
Strand 4
B
183 190anti-parallel
Strand 5
B
195 199anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 158first strand
Strand 2
B
212 214anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
113 116first strand
Strand 2
C
76 82parallel
Strand 3
C
66 73anti-parallel
Strand 4
C
51 63anti-parallel
Strand 5
C
93 102anti-parallel
Strand 6
C
119 121anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
148 149first strand
Strand 2
C
135 139anti-parallel
Strand 3
C
218 226parallel
Strand 4
C
183 190anti-parallel
Strand 5
C
195 199anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
156 158first strand
Strand 2
C
212 214anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il