Analysis of interatomic Contacts of Structural Units in PDB entry:
4RHF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RHF entry

There is 1 chain in PDB entry 4RHF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 4GLY 203
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 4RHF. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
18 32Right-handed alpha
Helix 2
2
A
41 53Right-handed alpha
Helix 3
3
A
59 72Right-handed alpha
Helix 4
4
A
88 92Right-handed 310
Helix 5
5
A
106 116Right-handed alpha
Helix 6
6
A
120 132Right-handed alpha
Helix 7
7
A
146 159Right-handed alpha
Helix 8
8
A
176 192Right-handed alpha
Helix 9
9
A
195 199Right-handed 310
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There is 1 sheet ( A) in PDB entry 4RHF.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
78 80first strand
Strand 2
A
35 40parallel
Strand 3
A
8 13parallel
Strand 4
A
99 105parallel
Strand 5
A
135 140parallel
Strand 6
A
162 163parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il