Analysis of interatomic Contacts of Structural Units in PDB entry:
4RHJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RHJ entry

There are 6 chains in PDB entry 4RHJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -1LYS 298
B
 SER -1LYS 298
C
 SER -1LEU 297
D
 SER -1LYS 298
E
 SER -1LYS 298
F
 SER -1LYS 298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 63 helices in PDB entry 4RHJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 11Right-handed alpha
Helix 2
2
A
41 47Right-handed alpha
Helix 3
3
A
95 112Right-handed alpha
Helix 4
4
A
127 138Right-handed alpha
Helix 5
5
A
159 167Right-handed alpha
Helix 6
6
A
182 192Right-handed alpha
Helix 7
7
A
226 228Right-handed 310
Helix 8
8
A
245 255Right-handed alpha
Helix 9
9
A
270 274Right-handed 310
Helix 10
10
A
282 297Right-handed alpha
Helix 11
11
B
2 11Right-handed alpha
Helix 12
12
B
40 48Right-handed alpha
Helix 13
13
B
99 114Right-handed alpha
Helix 14
14
B
125 138Right-handed alpha
Helix 15
15
B
161 166Right-handed alpha
Helix 16
16
B
182 192Right-handed alpha
Helix 17
17
B
226 228Right-handed 310
Helix 18
18
B
245 255Right-handed alpha
Helix 19
19
B
270 274Right-handed 310
Helix 20
20
B
282 298Right-handed alpha
Helix 21
21
C
2 11Right-handed alpha
Helix 22
22
C
40 48Right-handed alpha
Helix 23
23
C
95 113Right-handed alpha
Helix 24
24
C
125 138Right-handed alpha
Helix 25
25
C
159 166Right-handed alpha
Helix 26
26
C
184 193Right-handed alpha
Helix 27
27
C
226 228Right-handed 310
Helix 28
28
C
245 255Right-handed alpha
Helix 29
29
C
270 274Right-handed 310
Helix 30
30
C
282 297Right-handed alpha
Helix 31
31
D
-1 1Right-handed 310
Helix 32
32
D
2 11Right-handed alpha
Helix 33
33
D
16 20Right-handed 310
Helix 34
34
D
40 48Right-handed alpha
Helix 35
35
D
95 113Right-handed alpha
Helix 36
36
D
125 138Right-handed alpha
Helix 37
37
D
159 167Right-handed alpha
Helix 38
38
D
182 192Right-handed alpha
Helix 39
39
D
226 228Right-handed 310
Helix 40
40
D
245 255Right-handed alpha
Helix 41
41
D
270 274Right-handed 310
Helix 42
42
D
282 297Right-handed alpha
Helix 43
43
E
0 11Right-handed alpha
Helix 44
44
E
40 47Right-handed alpha
Helix 45
45
E
95 114Right-handed alpha
Helix 46
46
E
125 138Right-handed alpha
Helix 47
47
E
159 167Right-handed alpha
Helix 48
48
E
182 190Right-handed alpha
Helix 49
49
E
226 228Right-handed 310
Helix 50
50
E
245 255Right-handed alpha
Helix 51
51
E
270 274Right-handed 310
Helix 52
52
E
282 297Right-handed alpha
Helix 53
53
F
2 11Right-handed alpha
Helix 54
54
F
16 20Right-handed 310
Helix 55
55
F
40 48Right-handed alpha
Helix 56
56
F
95 113Right-handed alpha
Helix 57
57
F
124 138Right-handed alpha
Helix 58
58
F
159 167Right-handed alpha
Helix 59
59
F
182 192Right-handed alpha
Helix 60
60
F
226 228Right-handed 310
Helix 61
61
F
245 255Right-handed alpha
Helix 62
62
F
270 274Right-handed 310
Helix 63
63
F
282 298Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 4RHJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 61first strand
Strand 2
A
75 83parallel
Strand 3
A
26 30parallel
Strand 4
A
116 120parallel
Strand 5
A
261 267parallel
Strand 6
A
219 224parallel
Strand 7
A
143 148parallel
Strand 8
A
170 176parallel
Strand 9
A
195 197parallel
Back to list of sheets
Back to top of page

There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 61first strand
Strand 2
B
75 83parallel
Strand 3
B
26 30parallel
Strand 4
B
116 120parallel
Strand 5
B
261 267parallel
Strand 6
B
219 224parallel
Strand 7
B
144 148parallel
Strand 8
B
172 176parallel
Strand 9
B
195 197parallel
Back to list of sheets
Back to top of page

There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 61first strand
Strand 2
C
75 83parallel
Strand 3
C
26 30parallel
Strand 4
C
116 120parallel
Strand 5
C
261 267parallel
Strand 6
C
219 224parallel
Strand 7
C
144 148parallel
Strand 8
C
172 176parallel
Strand 9
C
195 197parallel
Back to list of sheets
Back to top of page

There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
57 61first strand
Strand 2
D
75 83parallel
Strand 3
D
26 30parallel
Strand 4
D
116 120parallel
Strand 5
D
261 267parallel
Strand 6
D
219 224parallel
Strand 7
D
144 148parallel
Strand 8
D
172 176parallel
Strand 9
D
195 197parallel
Back to list of sheets
Back to top of page

There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
57 61first strand
Strand 2
E
75 83parallel
Strand 3
E
26 30parallel
Strand 4
E
116 120parallel
Strand 5
E
261 267parallel
Strand 6
E
219 224parallel
Strand 7
E
144 148parallel
Strand 8
E
172 176parallel
Strand 9
E
195 197parallel
Back to list of sheets
Back to top of page

There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
57 61first strand
Strand 2
F
75 83parallel
Strand 3
F
26 30parallel
Strand 4
F
116 120parallel
Strand 5
F
261 267parallel
Strand 6
F
219 224parallel
Strand 7
F
144 148parallel
Strand 8
F
172 176parallel
Strand 9
F
195 197parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il