Analysis of interatomic Contacts of Structural Units in PDB entry:
4RHM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RHM entry

There are 3 chains in PDB entry 4RHM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -1THR 306
B
 SER -1THR 306
C
 SER -1THR 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 42 helices in PDB entry 4RHM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-1 1Right-handed 310
Helix 2
2
A
2 11Right-handed alpha
Helix 3
3
A
16 20Right-handed 310
Helix 4
4
A
40 48Right-handed alpha
Helix 5
5
A
95 113Right-handed alpha
Helix 6
6
A
124 138Right-handed alpha
Helix 7
7
A
159 167Right-handed alpha
Helix 8
8
A
182 192Right-handed alpha
Helix 9
9
A
198 206Right-handed alpha
Helix 10
10
A
207 210Right-handed 310
Helix 11
11
A
226 228Right-handed 310
Helix 12
12
A
245 255Right-handed alpha
Helix 13
13
A
270 274Right-handed 310
Helix 14
14
A
282 302Right-handed alpha
Helix 15
15
B
-1 1Right-handed 310
Helix 16
16
B
2 11Right-handed alpha
Helix 17
17
B
16 20Right-handed 310
Helix 18
18
B
40 48Right-handed alpha
Helix 19
19
B
95 113Right-handed alpha
Helix 20
20
B
124 138Right-handed alpha
Helix 21
21
B
159 167Right-handed alpha
Helix 22
22
B
182 193Right-handed alpha
Helix 23
23
B
198 206Right-handed alpha
Helix 24
24
B
207 210Right-handed 310
Helix 25
25
B
226 228Right-handed 310
Helix 26
26
B
245 255Right-handed alpha
Helix 27
27
B
270 274Right-handed 310
Helix 28
28
B
282 302Right-handed alpha
Helix 29
29
C
-1 1Right-handed 310
Helix 30
30
C
2 10Right-handed alpha
Helix 31
31
C
16 20Right-handed 310
Helix 32
32
C
40 47Right-handed alpha
Helix 33
33
C
95 113Right-handed alpha
Helix 34
34
C
124 138Right-handed alpha
Helix 35
35
C
159 167Right-handed alpha
Helix 36
36
C
182 193Right-handed alpha
Helix 37
37
C
198 205Right-handed alpha
Helix 38
38
C
206 210Right-handed 310
Helix 39
39
C
226 228Right-handed 310
Helix 40
40
C
245 255Right-handed alpha
Helix 41
41
C
270 274Right-handed 310
Helix 42
42
C
282 302Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 4RHM. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 61first strand
Strand 2
A
75 83parallel
Strand 3
A
26 30parallel
Strand 4
A
116 120parallel
Strand 5
A
261 267parallel
Strand 6
A
219 224parallel
Strand 7
A
144 148parallel
Strand 8
A
172 176parallel
Strand 9
A
195 197parallel
Back to list of sheets
Back to top of page

There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 61first strand
Strand 2
B
75 83parallel
Strand 3
B
26 30parallel
Strand 4
B
116 120parallel
Strand 5
B
261 267parallel
Strand 6
B
219 224parallel
Strand 7
B
144 148parallel
Strand 8
B
172 176parallel
Strand 9
B
195 197parallel
Back to list of sheets
Back to top of page

There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 61first strand
Strand 2
C
75 83parallel
Strand 3
C
26 30parallel
Strand 4
C
116 120parallel
Strand 5
C
261 267parallel
Strand 6
C
219 224parallel
Strand 7
C
144 148parallel
Strand 8
C
172 176parallel
Strand 9
C
195 197parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il