Analysis of interatomic Contacts of Structural Units in PDB entry:
4RIZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RIZ entry

There are 6 chains in PDB entry 4RIZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3GLN 303
A
 TRP 305ARG 477
B
 ASN -1GLN 303
B
 TRP 305ARG 477
C
 ALA 0GLN 303
C
 TRP 305TRP 360
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 4RIZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 39Right-handed alpha
Helix 2
2
A
40 43Right-handed 310
Helix 3
3
A
64 78Right-handed alpha
Helix 4
4
A
96 110Right-handed alpha
Helix 5
5
A
115 118Right-handed 310
Helix 6
6
A
119 137Right-handed alpha
Helix 7
7
A
150 168Right-handed alpha
Helix 8
8
A
191 200Right-handed alpha
Helix 9
9
A
203 205Right-handed 310
Helix 10
10
A
219 233Right-handed alpha
Helix 11
11
A
254 265Right-handed alpha
Helix 12
12
A
275 282Right-handed 310
Helix 13
13
A
285 290Right-handed 310
Helix 14
14
A
291 295Right-handed 310
Helix 15
15
A
301 306Right-handed alpha
Helix 16
16
A
321 326Right-handed alpha
Helix 17
17
A
342 347Right-handed 310
Helix 18
18
A
355 391Right-handed alpha
Helix 19
19
A
416 418Right-handed 310
Helix 20
20
A
419 436Right-handed alpha
Helix 21
21
A
460 476Right-handed alpha
Helix 22
22
B
-1 3Right-handed 310
Helix 23
23
B
18 39Right-handed alpha
Helix 24
24
B
40 43Right-handed 310
Helix 25
25
B
64 78Right-handed alpha
Helix 26
26
B
96 110Right-handed alpha
Helix 27
27
B
115 118Right-handed 310
Helix 28
28
B
119 137Right-handed alpha
Helix 29
29
B
150 168Right-handed alpha
Helix 30
30
B
191 200Right-handed alpha
Helix 31
31
B
203 205Right-handed 310
Helix 32
32
B
219 233Right-handed alpha
Helix 33
33
B
254 265Right-handed alpha
Helix 34
34
B
275 282Right-handed 310
Helix 35
35
B
285 290Right-handed 310
Helix 36
36
B
291 295Right-handed 310
Helix 37
37
B
301 306Right-handed alpha
Helix 38
38
B
321 326Right-handed alpha
Helix 39
39
B
342 347Right-handed 310
Helix 40
40
B
355 391Right-handed alpha
Helix 41
41
B
416 418Right-handed 310
Helix 42
42
B
419 436Right-handed alpha
Helix 43
43
B
460 475Right-handed alpha
Helix 44
44
C
18 39Right-handed alpha
Helix 45
45
C
40 43Right-handed 310
Helix 46
46
C
64 78Right-handed alpha
Helix 47
47
C
96 110Right-handed alpha
Helix 48
48
C
122 137Right-handed alpha
Helix 49
49
C
150 168Right-handed alpha
Helix 50
50
C
191 200Right-handed alpha
Helix 51
51
C
203 205Right-handed 310
Helix 52
52
C
219 233Right-handed alpha
Helix 53
53
C
254 265Right-handed alpha
Helix 54
54
C
275 282Right-handed 310
Helix 55
55
C
285 290Right-handed 310
Helix 56
56
C
291 295Right-handed 310
Helix 57
57
C
301 306Right-handed alpha
Helix 58
58
C
321 326Right-handed alpha
Helix 59
59
C
342 347Right-handed 310
Helix 60
60
C
355 391Right-handed alpha
Helix 61
61
C
416 418Right-handed 310
Helix 62
62
C
419 434Right-handed alpha
Helix 63
63
C
460 476Right-handed alpha
Helix 64
64
D
18 39Right-handed alpha
Helix 65
65
D
40 43Right-handed 310
Helix 66
66
D
64 78Right-handed alpha
Helix 67
67
D
96 110Right-handed alpha
Helix 68
68
D
115 119Right-handed 310
Helix 69
69
D
121 137Right-handed alpha
Helix 70
70
D
150 168Right-handed alpha
Helix 71
71
D
191 200Right-handed alpha
Helix 72
72
D
203 205Right-handed 310
Helix 73
73
D
219 233Right-handed alpha
Helix 74
74
D
254 265Right-handed alpha
Helix 75
75
D
275 282Right-handed 310
Helix 76
76
D
285 290Right-handed 310
Helix 77
77
D
291 295Right-handed 310
Helix 78
78
D
301 306Right-handed alpha
Helix 79
79
D
321 326Right-handed alpha
Helix 80
80
D
342 347Right-handed 310
Helix 81
81
D
355 391Right-handed alpha
Helix 82
82
D
416 418Right-handed 310
Helix 83
83
D
419 436Right-handed alpha
Helix 84
84
D
460 475Right-handed alpha
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There are 12 sheets in PDB entry 4RIZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 148first strand
Strand 2
A
313 317anti-parallel
Strand 3
A
297 300anti-parallel
Strand 4
A
268 272parallel
Strand 5
A
236 243parallel
Strand 6
A
181 186parallel
Strand 7
A
207 210parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 397first strand
Strand 2
A
405 410anti-parallel
Strand 3
A
450 453anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
443 444first strand
Strand 2
A
447 448anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 148first strand
Strand 2
B
313 317anti-parallel
Strand 3
B
297 300anti-parallel
Strand 4
B
268 272parallel
Strand 5
B
236 243parallel
Strand 6
B
181 186parallel
Strand 7
B
207 210parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
395 397first strand
Strand 2
B
405 410anti-parallel
Strand 3
B
450 453anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
443 444first strand
Strand 2
B
447 448anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
144 148first strand
Strand 2
C
313 317anti-parallel
Strand 3
C
297 300anti-parallel
Strand 4
C
268 272parallel
Strand 5
C
236 243parallel
Strand 6
C
181 186parallel
Strand 7
C
207 210parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
395 397first strand
Strand 2
C
405 410anti-parallel
Strand 3
C
450 453anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
443 444first strand
Strand 2
C
447 448anti-parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
144 148first strand
Strand 2
D
313 317anti-parallel
Strand 3
D
297 300anti-parallel
Strand 4
D
268 272parallel
Strand 5
D
236 243parallel
Strand 6
D
181 186parallel
Strand 7
D
207 210parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
395 397first strand
Strand 2
D
405 410anti-parallel
Strand 3
D
450 453anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
443 444first strand
Strand 2
D
447 448anti-parallel
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