Analysis of interatomic Contacts of Structural Units in PDB entry:
4RJE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RJE entry

There are 4 chains in PDB entry 4RJE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 6TYR 374
B
 GLU 7TYR 374
C
 TYR 8TYR 374
D
 TYR 8TYR 374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 4RJE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 31Right-handed alpha
Helix 2
2
A
34 43Right-handed alpha
Helix 3
3
A
48 57Right-handed alpha
Helix 4
4
A
96 100Right-handed 310
Helix 5
5
A
103 116Right-handed alpha
Helix 6
6
A
128 137Right-handed alpha
Helix 7
7
A
150 165Right-handed alpha
Helix 8
8
A
181 188Right-handed alpha
Helix 9
9
A
198 202Right-handed 310
Helix 10
10
A
210 218Right-handed alpha
Helix 11
11
A
223 235Right-handed alpha
Helix 12
12
A
245 255Right-handed alpha
Helix 13
13
A
264 268Right-handed 310
Helix 14
14
A
275 288Right-handed alpha
Helix 15
15
A
301 311Right-handed alpha
Helix 16
16
A
319 353Right-handed alpha
Helix 17
17
A
356 362Right-handed alpha
Helix 18
18
B
22 31Right-handed alpha
Helix 19
19
B
34 43Right-handed alpha
Helix 20
20
B
48 57Right-handed alpha
Helix 21
21
B
96 100Right-handed 310
Helix 22
22
B
103 116Right-handed alpha
Helix 23
23
B
128 137Right-handed alpha
Helix 24
24
B
150 164Right-handed alpha
Helix 25
25
B
181 187Right-handed alpha
Helix 26
26
B
210 218Right-handed alpha
Helix 27
27
B
223 235Right-handed alpha
Helix 28
28
B
245 255Right-handed alpha
Helix 29
29
B
264 268Right-handed 310
Helix 30
30
B
275 288Right-handed alpha
Helix 31
31
B
301 311Right-handed alpha
Helix 32
32
B
319 353Right-handed alpha
Helix 33
33
B
356 362Right-handed alpha
Helix 34
34
C
23 31Right-handed alpha
Helix 35
35
C
34 43Right-handed alpha
Helix 36
36
C
48 57Right-handed alpha
Helix 37
37
C
96 100Right-handed 310
Helix 38
38
C
103 116Right-handed alpha
Helix 39
39
C
128 137Right-handed alpha
Helix 40
40
C
150 165Right-handed alpha
Helix 41
41
C
181 187Right-handed alpha
Helix 42
42
C
198 202Right-handed 310
Helix 43
43
C
223 235Right-handed alpha
Helix 44
44
C
245 255Right-handed alpha
Helix 45
45
C
264 268Right-handed 310
Helix 46
46
C
275 288Right-handed alpha
Helix 47
47
C
301 311Right-handed alpha
Helix 48
48
C
319 353Right-handed alpha
Helix 49
49
C
356 362Right-handed alpha
Helix 50
50
D
24 31Right-handed alpha
Helix 51
51
D
34 43Right-handed alpha
Helix 52
52
D
48 57Right-handed alpha
Helix 53
53
D
96 100Right-handed 310
Helix 54
54
D
103 116Right-handed alpha
Helix 55
55
D
128 137Right-handed alpha
Helix 56
56
D
150 165Right-handed alpha
Helix 57
57
D
181 187Right-handed alpha
Helix 58
58
D
198 202Right-handed 310
Helix 59
59
D
210 218Right-handed alpha
Helix 60
60
D
223 235Right-handed alpha
Helix 61
61
D
245 255Right-handed alpha
Helix 62
62
D
264 268Right-handed 310
Helix 63
63
D
275 288Right-handed alpha
Helix 64
64
D
301 311Right-handed alpha
Helix 65
65
D
319 353Right-handed alpha
Helix 66
66
D
356 362Right-handed alpha
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There are 12 sheets in PDB entry 4RJE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
365 367anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 80first strand
Strand 2
A
83 85anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 91first strand
Strand 2
A
315 318parallel
Strand 3
A
293 295parallel
Strand 4
A
259 262parallel
Strand 5
A
238 243parallel
Strand 6
A
169 172parallel
Strand 7
A
141 145parallel
Strand 8
A
119 122parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 63first strand
Strand 2
B
365 367anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 80first strand
Strand 2
B
83 85anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 91first strand
Strand 2
B
315 318parallel
Strand 3
B
293 295parallel
Strand 4
B
259 262parallel
Strand 5
B
238 243parallel
Strand 6
B
169 172parallel
Strand 7
B
141 145parallel
Strand 8
B
119 122parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
61 63first strand
Strand 2
C
365 367anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
78 80first strand
Strand 2
C
83 85anti-parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
89 91first strand
Strand 2
C
315 318parallel
Strand 3
C
293 295parallel
Strand 4
C
259 262parallel
Strand 5
C
238 243parallel
Strand 6
C
169 172parallel
Strand 7
C
141 145parallel
Strand 8
C
119 122parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 63first strand
Strand 2
D
365 367anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
78 80first strand
Strand 2
D
83 85anti-parallel
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There are 8 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
89 91first strand
Strand 2
D
315 318parallel
Strand 3
D
293 295parallel
Strand 4
D
259 262parallel
Strand 5
D
238 243parallel
Strand 6
D
169 172parallel
Strand 7
D
141 145parallel
Strand 8
D
119 122parallel
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