Analysis of interatomic Contacts of Structural Units in PDB entry:
4RJX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RJX entry

There is 1 chain in PDB entry 4RJX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU -10PHE 414
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 4RJX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
118 123Right-handed alpha
Helix 2
2
A
136 145Right-handed 310
Helix 3
3
A
226 230Right-handed 310
Helix 4
4
A
237 241Right-handed 310
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There are 3 sheets in PDB entry 4RJX. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 13first strand
Strand 2
A
18 22anti-parallel
Strand 3
A
28 44anti-parallel
Strand 4
A
53 69anti-parallel
Strand 5
A
234 235anti-parallel
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There are 19 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 13first strand
Strand 2
A
18 22anti-parallel
Strand 3
A
28 44anti-parallel
Strand 4
A
402 414anti-parallel
Strand 5
A
380 392anti-parallel
Strand 6
A
363 375anti-parallel
Strand 7
A
334 348anti-parallel
Strand 8
A
295 307anti-parallel
Strand 9
A
274 287anti-parallel
Strand 10
A
257 271anti-parallel
Strand 11
A
198 210anti-parallel
Strand 12
A
180 195anti-parallel
Strand 13
A
162 174anti-parallel
Strand 14
A
150 158anti-parallel
Strand 15
A
107 112anti-parallel
Strand 16
A
93 100anti-parallel
Strand 17
A
73 80anti-parallel
Strand 18
A
53 69anti-parallel
Strand 19
A
234 235anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 316first strand
Strand 2
A
321 325anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il