Analysis of interatomic Contacts of Structural Units in PDB entry:
4RJZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RJZ entry

There is 1 chain in PDB entry 4RJZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 29GLY 410
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 4RJZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
41 53Right-handed alpha
Helix 2
2
A
68 79Right-handed alpha
Helix 3
3
A
92 99Right-handed alpha
Helix 4
4
A
105 112Right-handed alpha
Helix 5
5
A
116 120Right-handed 310
Helix 6
6
A
121 128Right-handed alpha
Helix 7
7
A
150 156Right-handed alpha
Helix 8
8
A
166 178Right-handed alpha
Helix 9
9
A
179 183Right-handed 310
Helix 10
10
A
194 208Right-handed alpha
Helix 11
11
A
211 215Right-handed 310
Helix 12
12
A
217 233Right-handed alpha
Helix 13
13
A
237 242Right-handed 310
Helix 14
14
A
244 254Right-handed alpha
Helix 15
15
A
263 265Right-handed 310
Helix 16
16
A
266 274Right-handed alpha
Helix 17
17
A
309 323Right-handed alpha
Helix 18
18
A
326 332Right-handed alpha
Helix 19
19
A
347 361Right-handed alpha
Helix 20
20
A
372 389Right-handed alpha
Helix 21
21
A
393 407Right-handed alpha
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There are 3 sheets in PDB entry 4RJZ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 63first strand
Strand 2
A
30 35parallel
Strand 3
A
85 89parallel
Strand 4
A
299 303anti-parallel
Strand 5
A
137 138anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 130first strand
Strand 2
A
133 134anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 262first strand
Strand 2
A
145 149anti-parallel
Strand 3
A
278 281anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il