Analysis of interatomic Contacts of Structural Units in PDB entry:
4RN7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RN7 entry

There is 1 chain in PDB entry 4RN7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 114GLY 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 4RN7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
140 158Right-handed alpha
Helix 2
2
A
175 186Right-handed alpha
Helix 3
3
A
219 236Right-handed alpha
Helix 4
4
A
247 253Right-handed alpha
Helix 5
5
A
267 275Right-handed alpha
Helix 6
6
A
276 299Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4RN7.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
162 166first strand
Strand 2
A
117 123parallel
Strand 3
A
190 197parallel
Strand 4
A
257 264parallel
Strand 5
A
208 212anti-parallel
Strand 6
A
239 244parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il