Analysis of interatomic Contacts of Structural Units in PDB entry:
4RNV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RNV entry

There are 4 chains in PDB entry 4RNV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 6ARG 390
B
 GLY 6ARG 390
C
 GLY 6ARG 390
D
 GLY 6LYS 117
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 75 helices in PDB entry 4RNV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 15Right-handed 310
Helix 2
2
A
29 37Right-handed alpha
Helix 3
3
A
47 53Right-handed alpha
Helix 4
4
A
55 62Right-handed alpha
Helix 5
5
A
70 74Right-handed 310
Helix 6
6
A
87 94Right-handed alpha
Helix 7
7
A
113 117Right-handed 310
Helix 8
8
A
151 160Right-handed alpha
Helix 9
9
A
175 179Right-handed 310
Helix 10
10
A
189 205Right-handed alpha
Helix 11
11
A
217 221Right-handed 310
Helix 12
12
A
222 229Right-handed alpha
Helix 13
13
A
243 253Right-handed alpha
Helix 14
14
A
261 283Right-handed alpha
Helix 15
15
A
295 302Right-handed alpha
Helix 16
16
A
315 320Right-handed alpha
Helix 17
17
A
320 335Right-handed alpha
Helix 18
18
A
353 357Right-handed 310
Helix 19
19
A
359 377Right-handed alpha
Helix 20
20
B
9 15Right-handed 310
Helix 21
21
B
29 37Right-handed alpha
Helix 22
22
B
47 53Right-handed alpha
Helix 23
23
B
55 62Right-handed alpha
Helix 24
24
B
70 74Right-handed 310
Helix 25
25
B
87 95Right-handed alpha
Helix 26
26
B
113 117Right-handed 310
Helix 27
27
B
151 160Right-handed alpha
Helix 28
28
B
175 179Right-handed 310
Helix 29
29
B
189 206Right-handed alpha
Helix 30
30
B
217 221Right-handed 310
Helix 31
31
B
222 229Right-handed alpha
Helix 32
32
B
243 253Right-handed alpha
Helix 33
33
B
261 283Right-handed alpha
Helix 34
34
B
295 302Right-handed alpha
Helix 35
35
B
315 320Right-handed alpha
Helix 36
36
B
320 335Right-handed alpha
Helix 37
37
B
353 357Right-handed 310
Helix 38
38
B
359 377Right-handed alpha
Helix 39
39
C
9 15Right-handed 310
Helix 40
40
C
29 37Right-handed alpha
Helix 41
41
C
47 53Right-handed alpha
Helix 42
42
C
57 62Right-handed alpha
Helix 43
43
C
70 74Right-handed 310
Helix 44
44
C
87 93Right-handed alpha
Helix 45
45
C
113 117Right-handed 310
Helix 46
46
C
151 160Right-handed alpha
Helix 47
47
C
175 179Right-handed 310
Helix 48
48
C
189 206Right-handed alpha
Helix 49
49
C
217 221Right-handed 310
Helix 50
50
C
222 229Right-handed alpha
Helix 51
51
C
243 253Right-handed alpha
Helix 52
52
C
261 283Right-handed alpha
Helix 53
53
C
295 302Right-handed alpha
Helix 54
54
C
315 320Right-handed alpha
Helix 55
55
C
320 335Right-handed alpha
Helix 56
56
C
353 357Right-handed 310
Helix 57
57
C
359 377Right-handed alpha
Helix 58
58
D
9 13Right-handed 310
Helix 59
59
D
29 37Right-handed alpha
Helix 60
60
D
47 53Right-handed alpha
Helix 61
61
D
55 62Right-handed alpha
Helix 62
62
D
87 93Right-handed alpha
Helix 63
63
D
113 117Right-handed 310
Helix 64
64
D
151 160Right-handed alpha
Helix 65
65
D
175 179Right-handed 310
Helix 66
66
D
189 205Right-handed alpha
Helix 67
67
D
217 221Right-handed 310
Helix 68
68
D
222 229Right-handed alpha
Helix 69
69
D
243 253Right-handed alpha
Helix 70
70
D
261 283Right-handed alpha
Helix 71
71
D
295 302Right-handed alpha
Helix 72
72
D
315 320Right-handed alpha
Helix 73
73
D
320 335Right-handed alpha
Helix 74
74
D
353 357Right-handed 310
Helix 75
75
D
359 377Right-handed alpha
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There are 14 sheets in PDB entry 4RNV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
42 45parallel
Strand 3
A
20 23parallel
Strand 4
A
383 387parallel
Strand 5
A
339 343parallel
Strand 6
A
286 290parallel
Strand 7
A
209 215parallel
Strand 8
A
166 168parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
42 45parallel
Strand 3
A
20 23parallel
Strand 4
A
383 387parallel
Strand 5
A
339 343parallel
Strand 6
A
286 290parallel
Strand 7
A
209 215parallel
Strand 8
A
172 173parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 121first strand
Strand 2
A
124 126anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 235first strand
Strand 2
A
257 259parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 131first strand
Strand 2
B
42 45parallel
Strand 3
B
20 23parallel
Strand 4
B
383 387parallel
Strand 5
B
339 343parallel
Strand 6
B
286 290parallel
Strand 7
B
209 215parallel
Strand 8
B
166 168parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 131first strand
Strand 2
B
42 45parallel
Strand 3
B
20 23parallel
Strand 4
B
383 387parallel
Strand 5
B
339 343parallel
Strand 6
B
286 290parallel
Strand 7
B
209 215parallel
Strand 8
B
172 173parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 121first strand
Strand 2
B
124 126anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 235first strand
Strand 2
B
257 259parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
130 131first strand
Strand 2
C
42 45parallel
Strand 3
C
20 23parallel
Strand 4
C
383 387parallel
Strand 5
C
339 343parallel
Strand 6
C
286 290parallel
Strand 7
C
209 215parallel
Strand 8
C
166 173parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
119 121first strand
Strand 2
C
124 126anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
233 235first strand
Strand 2
C
257 259parallel
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There are 8 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
130 131first strand
Strand 2
D
42 45parallel
Strand 3
D
20 23parallel
Strand 4
D
383 387parallel
Strand 5
D
339 343parallel
Strand 6
D
286 290parallel
Strand 7
D
209 215parallel
Strand 8
D
166 173parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
119 121first strand
Strand 2
D
124 126anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
233 235first strand
Strand 2
D
257 259parallel
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