Analysis of interatomic Contacts of Structural Units in PDB entry:
4RO5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RO5 entry

There is 1 chain in PDB entry 4RO5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1GLN 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4RO5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 7Right-handed 310
Helix 2
2
A
8 12Right-handed 310
Helix 3
3
A
27 41Right-handed alpha
Helix 4
4
A
43 65Right-handed alpha
Helix 5
5
A
65 70Right-handed alpha
Helix 6
6
A
73 88Right-handed alpha
Helix 7
7
A
100 124Right-handed alpha
Helix 8
8
A
133 141Right-handed alpha
Helix 9
9
A
156 167Right-handed alpha
Helix 10
10
A
169 200Right-handed alpha
Helix 11
11
A
215 229Right-handed alpha
Helix 12
12
A
252 263Right-handed alpha
Helix 13
13
A
280 295Right-handed alpha
Helix 14
14
A
296 301Right-handed 310
Helix 15
15
A
304 308Right-handed 310
Helix 16
16
A
328 339Right-handed alpha
Helix 17
17
A
344 353Right-handed alpha
Helix 18
18
A
369 374Right-handed alpha
Helix 19
19
A
375 377Right-handed 310
Helix 20
20
A
384 386Right-handed 310
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There are 2 sheets in PDB entry 4RO5. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 153first strand
Strand 2
A
15 19parallel
Strand 3
A
358 362parallel
Strand 4
A
380 382parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 269first strand
Strand 2
A
206 212anti-parallel
Strand 3
A
243 249anti-parallel
Strand 4
A
234 240anti-parallel
Strand 5
A
342 343parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il