Analysis of interatomic Contacts of Structural Units in PDB entry:
4ROU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4ROU entry

There are 2 chains in PDB entry 4ROU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 278GLN 581
A
 PRO 277GLN 581
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4ROU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
278 290Right-handed alpha
Helix 2
2
B
294 311Right-handed alpha
Helix 3
3
B
316 328Right-handed alpha
Helix 4
4
B
361 373Right-handed alpha
Helix 5
5
B
392 400Right-handed alpha
Helix 6
6
B
410 415Right-handed alpha
Helix 7
7
B
421 435Right-handed alpha
Helix 8
8
B
447 450Right-handed 310
Helix 9
9
B
458 465Right-handed alpha
Helix 10
10
B
477 490Right-handed alpha
Helix 11
11
B
511 525Right-handed alpha
Helix 12
12
A
278 290Right-handed alpha
Helix 13
13
A
294 311Right-handed alpha
Helix 14
14
A
316 328Right-handed alpha
Helix 15
15
A
361 374Right-handed alpha
Helix 16
16
A
392 400Right-handed alpha
Helix 17
17
A
410 414Right-handed alpha
Helix 18
18
A
421 435Right-handed alpha
Helix 19
19
A
447 450Right-handed 310
Helix 20
20
A
456 465Right-handed alpha
Helix 21
21
A
477 490Right-handed alpha
Helix 22
22
A
511 525Right-handed alpha
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There are 4 sheets in PDB entry 4ROU. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
336 340first strand
Strand 2
B
575 580anti-parallel
Strand 3
B
555 560anti-parallel
Strand 4
B
550 551anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
468 472first strand
Strand 2
B
440 445parallel
Strand 3
B
406 409parallel
Strand 4
B
494 496parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 340first strand
Strand 2
A
575 580anti-parallel
Strand 3
A
555 560anti-parallel
Strand 4
A
550 551anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
468 472first strand
Strand 2
A
440 445parallel
Strand 3
A
406 409parallel
Strand 4
A
494 496parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il