Analysis of interatomic Contacts of Structural Units in PDB entry:
4RR5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RR5 entry

There is 1 chain in PDB entry 4RR5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4RR5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 23Right-handed 310
Helix 2
2
A
24 39Right-handed alpha
Helix 3
3
A
41 47Right-handed alpha
Helix 4
4
A
49 55Right-handed alpha
Helix 5
5
A
55 77Right-handed alpha
Helix 6
6
A
89 98Right-handed alpha
Helix 7
7
A
102 120Right-handed alpha
Helix 8
8
A
132 141Right-handed alpha
Helix 9
9
A
162 172Right-handed alpha
Helix 10
10
A
189 191Right-handed 310
Helix 11
11
A
192 205Right-handed alpha
Helix 12
12
A
226 236Right-handed alpha
Helix 13
13
A
244 255Right-handed alpha
Helix 14
14
A
266 274Right-handed alpha
Helix 15
15
A
286 292Right-handed alpha
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There are 3 sheets in PDB entry 4RR5. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
3 7parallel
Strand 3
A
258 262parallel
Strand 4
A
280 284parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 180first strand
Strand 2
A
124 129anti-parallel
Strand 3
A
156 161anti-parallel
Strand 4
A
146 153anti-parallel
Strand 5
A
242 243parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 217first strand
Strand 2
A
220 224anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il