Analysis of interatomic Contacts of Structural Units in PDB entry:
4RVC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RVC entry

There is 1 chain in PDB entry 4RVC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 2LYS 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4RVC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
41 50Right-handed alpha
Helix 2
2
A
66 69Right-handed 310
Helix 3
3
A
70 77Right-handed alpha
Helix 4
4
A
92 105Right-handed alpha
Helix 5
5
A
107 122Right-handed alpha
Helix 6
6
A
131 135Right-handed 310
Helix 7
7
A
136 152Right-handed alpha
Helix 8
8
A
166 184Right-handed alpha
Helix 9
9
A
193 201Right-handed alpha
Helix 10
10
A
217 226Right-handed alpha
Helix 11
11
A
231 241Right-handed alpha
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There are 2 sheets in PDB entry 4RVC. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
19 26first strand
Strand 2
A
4 11anti-parallel
Strand 3
A
57 62anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
78 81first strand
Strand 2
A
155 159parallel
Strand 3
A
186 190parallel
Strand 4
A
31 35parallel
Strand 5
A
203 208parallel
Strand 6
A
211 216anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il