Analysis of interatomic Contacts of Structural Units in PDB entry:
4RVH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RVH entry

There are 2 chains in PDB entry 4RVH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 6CYS 348
A
 ASP 350HIS 423
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4RVH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
69 75Right-handed alpha
Helix 2
2
A
84 103Right-handed alpha
Helix 3
3
A
118 127Right-handed alpha
Helix 4
4
A
137 147Right-handed alpha
Helix 5
5
A
157 168Right-handed alpha
Helix 6
6
A
179 183Right-handed 310
Helix 7
7
A
185 197Right-handed alpha
Helix 8
8
A
209 216Right-handed alpha
Helix 9
9
A
218 222Right-handed 310
Helix 10
10
A
231 240Right-handed alpha
Helix 11
11
A
253 256Right-handed 310
Helix 12
12
A
274 286Right-handed alpha
Helix 13
13
A
290 318Right-handed alpha
Helix 14
14
A
328 339Right-handed alpha
Helix 15
15
A
369 374Right-handed alpha
Helix 16
16
A
385 387Right-handed 310
Helix 17
17
A
388 395Right-handed alpha
Helix 18
18
A
396 402Right-handed alpha
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There are 4 sheets in PDB entry 4RVH. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 9first strand
Strand 2
A
66 67anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 30first strand
Strand 2
A
49 56anti-parallel
Strand 3
A
62 64anti-parallel
Strand 4
A
228 229anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 152first strand
Strand 2
A
130 134parallel
Strand 3
A
109 113parallel
Strand 4
A
173 177parallel
Strand 5
A
202 208parallel
Strand 6
A
258 265anti-parallel
Strand 7
A
244 252anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 368first strand
Strand 2
A
348 349parallel
Strand 3
A
322 325parallel
Strand 4
A
380 383parallel
Strand 5
A
405 408parallel
Strand 6
A
414 416anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il