Analysis of interatomic Contacts of Structural Units in PDB entry:
4RVP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RVP entry

There are 6 chains in PDB entry 4RVP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 14THR 166
B
 LYS 14THR 166
C
 LYS 14THR 166
D
 MET 9THR 166
E
 LYS 14THR 166
F
 LYS 14THR 166
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 4RVP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
67 73Right-handed 310
Helix 2
2
A
144 148Right-handed 310
Helix 3
3
B
67 73Right-handed 310
Helix 4
4
C
67 73Right-handed 310
Helix 5
5
D
67 73Right-handed 310
Helix 6
6
E
67 73Right-handed 310
Helix 7
7
F
67 73Right-handed 310
Helix 8
8
F
143 147Right-handed 310
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There are 12 sheets in PDB entry 4RVP. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 113first strand
Strand 2
A
41 48anti-parallel
Strand 3
A
28 35anti-parallel
Strand 4
A
15 21anti-parallel
Strand 5
A
162 163anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 101first strand
Strand 2
A
53 60anti-parallel
Strand 3
A
128 132anti-parallel
Strand 4
A
155 160anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 113first strand
Strand 2
B
41 48anti-parallel
Strand 3
B
28 35anti-parallel
Strand 4
B
15 21anti-parallel
Strand 5
B
162 163anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 101first strand
Strand 2
B
53 60anti-parallel
Strand 3
B
128 132anti-parallel
Strand 4
B
155 160anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
107 113first strand
Strand 2
C
41 48anti-parallel
Strand 3
C
28 35anti-parallel
Strand 4
C
15 21anti-parallel
Strand 5
C
162 163anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
95 101first strand
Strand 2
C
53 60anti-parallel
Strand 3
C
128 132anti-parallel
Strand 4
C
155 160anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
107 113first strand
Strand 2
D
41 48anti-parallel
Strand 3
D
28 36anti-parallel
Strand 4
D
14 21anti-parallel
Strand 5
D
162 163anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
95 101first strand
Strand 2
D
53 60anti-parallel
Strand 3
D
128 132anti-parallel
Strand 4
D
155 160anti-parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
95 101first strand
Strand 2
E
53 60anti-parallel
Strand 3
E
128 132anti-parallel
Strand 4
E
155 160anti-parallel
Strand 5
E
15 23anti-parallel
Strand 6
E
28 35anti-parallel
Strand 7
E
41 48anti-parallel
Strand 8
E
107 113anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
95 101first strand
Strand 2
E
53 60anti-parallel
Strand 3
E
128 132anti-parallel
Strand 4
E
155 160anti-parallel
Strand 5
E
15 23anti-parallel
Strand 6
E
162 163anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
107 113first strand
Strand 2
F
41 48anti-parallel
Strand 3
F
28 35anti-parallel
Strand 4
F
15 21anti-parallel
Strand 5
F
162 163anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
95 101first strand
Strand 2
F
53 60anti-parallel
Strand 3
F
128 132anti-parallel
Strand 4
F
155 160anti-parallel
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