Analysis of interatomic Contacts of Structural Units in PDB entry:
4RVS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RVS entry

There are 2 chains in PDB entry 4RVS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1PRO 329
B
 SER 1PRO 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4RVS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 16Right-handed 310
Helix 2
2
A
41 49Right-handed alpha
Helix 3
3
A
116 136Right-handed alpha
Helix 4
4
A
153 166Right-handed alpha
Helix 5
5
A
176 186Right-handed alpha
Helix 6
6
A
197 209Right-handed alpha
Helix 7
7
A
225 232Right-handed alpha
Helix 8
8
A
254 260Right-handed alpha
Helix 9
9
A
269 274Right-handed 310
Helix 10
10
A
276 293Right-handed alpha
Helix 11
11
A
308 318Right-handed alpha
Helix 12
12
B
12 16Right-handed 310
Helix 13
13
B
41 49Right-handed alpha
Helix 14
14
B
116 136Right-handed alpha
Helix 15
15
B
153 166Right-handed alpha
Helix 16
16
B
176 186Right-handed alpha
Helix 17
17
B
197 209Right-handed alpha
Helix 18
18
B
225 232Right-handed alpha
Helix 19
19
B
254 260Right-handed alpha
Helix 20
20
B
269 274Right-handed 310
Helix 21
21
B
276 293Right-handed alpha
Helix 22
22
B
308 318Right-handed alpha
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There are 7 sheets in PDB entry 4RVS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 21first strand
Strand 2
A
2 7anti-parallel
Strand 3
A
58 59anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 104first strand
Strand 2
A
30 40anti-parallel
Strand 3
A
64 71anti-parallel
Strand 4
A
87 90anti-parallel
Strand 5
A
108 110anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 104first strand
Strand 2
A
30 40anti-parallel
Strand 3
A
324 328anti-parallel
Strand 4
A
300 305parallel
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There are 12 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 193first strand
Strand 2
A
169 174parallel
Strand 3
A
145 148parallel
Strand 4
A
214 219parallel
Strand 5
A
233 241parallel
Strand 6
A
264 266parallel
Strand 7
B
264 266anti-parallel
Strand 8
B
233 241parallel
Strand 9
B
214 219parallel
Strand 10
B
145 148parallel
Strand 11
B
169 174parallel
Strand 12
B
190 193parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 21first strand
Strand 2
B
2 7anti-parallel
Strand 3
B
58 59anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 104first strand
Strand 2
B
30 40anti-parallel
Strand 3
B
64 71anti-parallel
Strand 4
B
87 90anti-parallel
Strand 5
B
108 110anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 104first strand
Strand 2
B
30 40anti-parallel
Strand 3
B
324 328anti-parallel
Strand 4
B
300 305parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il