Analysis of interatomic Contacts of Structural Units in PDB entry:
4RVU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RVU entry

There are 4 chains in PDB entry 4RVU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0PRO 328
B
 SER 0PRO 328
C
 MET 1PRO 328
D
 SER 0PRO 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 46 helices in PDB entry 4RVU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 15Right-handed 310
Helix 2
2
A
40 48Right-handed alpha
Helix 3
3
A
72 79Right-handed 310
Helix 4
4
A
115 135Right-handed alpha
Helix 5
5
A
152 165Right-handed alpha
Helix 6
6
A
175 185Right-handed alpha
Helix 7
7
A
196 209Right-handed alpha
Helix 8
8
A
224 231Right-handed alpha
Helix 9
9
A
253 259Right-handed alpha
Helix 10
10
A
268 273Right-handed 310
Helix 11
11
A
275 292Right-handed alpha
Helix 12
12
A
307 317Right-handed alpha
Helix 13
13
B
11 13Right-handed 310
Helix 14
14
B
40 49Right-handed alpha
Helix 15
15
B
73 79Right-handed 310
Helix 16
16
B
115 135Right-handed alpha
Helix 17
17
B
152 165Right-handed alpha
Helix 18
18
B
175 186Right-handed alpha
Helix 19
19
B
196 207Right-handed alpha
Helix 20
20
B
224 231Right-handed alpha
Helix 21
21
B
253 259Right-handed alpha
Helix 22
22
B
268 273Right-handed 310
Helix 23
23
B
275 292Right-handed alpha
Helix 24
24
B
307 317Right-handed alpha
Helix 25
25
C
11 13Right-handed 310
Helix 26
26
C
40 49Right-handed alpha
Helix 27
27
C
115 135Right-handed alpha
Helix 28
28
C
152 165Right-handed alpha
Helix 29
29
C
175 185Right-handed alpha
Helix 30
30
C
196 208Right-handed alpha
Helix 31
31
C
224 231Right-handed alpha
Helix 32
32
C
253 259Right-handed alpha
Helix 33
33
C
268 273Right-handed 310
Helix 34
34
C
275 292Right-handed alpha
Helix 35
35
C
307 317Right-handed alpha
Helix 36
36
D
11 15Right-handed 310
Helix 37
37
D
40 48Right-handed alpha
Helix 38
38
D
115 135Right-handed alpha
Helix 39
39
D
152 165Right-handed alpha
Helix 40
40
D
175 185Right-handed alpha
Helix 41
41
D
196 208Right-handed alpha
Helix 42
42
D
224 231Right-handed alpha
Helix 43
43
D
253 259Right-handed alpha
Helix 44
44
D
268 273Right-handed 310
Helix 45
45
D
275 292Right-handed alpha
Helix 46
46
D
307 317Right-handed alpha
Back to top of page

There are 14 sheets in PDB entry 4RVU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 20first strand
Strand 2
A
1 6anti-parallel
Strand 3
A
57 58anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 103first strand
Strand 2
A
29 38anti-parallel
Strand 3
A
63 70anti-parallel
Strand 4
A
86 89anti-parallel
Strand 5
A
107 109anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 103first strand
Strand 2
A
29 38anti-parallel
Strand 3
A
323 327anti-parallel
Strand 4
A
299 304parallel
Back to list of sheets
Back to top of page

There are 12 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 191first strand
Strand 2
A
168 172parallel
Strand 3
A
144 147parallel
Strand 4
A
213 218parallel
Strand 5
A
232 240parallel
Strand 6
A
263 265parallel
Strand 7
D
263 265anti-parallel
Strand 8
D
232 240parallel
Strand 9
D
213 218parallel
Strand 10
D
144 147parallel
Strand 11
D
168 172parallel
Strand 12
D
189 191parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 20first strand
Strand 2
B
1 6anti-parallel
Strand 3
B
57 58anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 103first strand
Strand 2
B
29 39anti-parallel
Strand 3
B
62 70anti-parallel
Strand 4
B
86 89anti-parallel
Strand 5
B
107 109anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 103first strand
Strand 2
B
29 39anti-parallel
Strand 3
B
323 327anti-parallel
Strand 4
B
299 304parallel
Back to list of sheets
Back to top of page

There are 12 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
189 191first strand
Strand 2
B
168 172parallel
Strand 3
B
144 147parallel
Strand 4
B
213 218parallel
Strand 5
B
232 240parallel
Strand 6
B
263 265parallel
Strand 7
C
263 265anti-parallel
Strand 8
C
232 240parallel
Strand 9
C
213 218parallel
Strand 10
C
144 147parallel
Strand 11
C
168 172parallel
Strand 12
C
189 191parallel
Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 19first strand
Strand 2
C
2 6anti-parallel
Strand 3
C
57 58anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
99 103first strand
Strand 2
C
29 38anti-parallel
Strand 3
C
63 70anti-parallel
Strand 4
C
86 89anti-parallel
Strand 5
C
107 109anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
99 103first strand
Strand 2
C
29 38anti-parallel
Strand 3
C
323 327anti-parallel
Strand 4
C
299 304parallel
Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
16 20first strand
Strand 2
D
1 6anti-parallel
Strand 3
D
57 58anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
99 103first strand
Strand 2
D
29 38anti-parallel
Strand 3
D
63 70anti-parallel
Strand 4
D
86 89anti-parallel
Strand 5
D
107 109anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
99 103first strand
Strand 2
D
29 38anti-parallel
Strand 3
D
323 327anti-parallel
Strand 4
D
299 304parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il