Analysis of interatomic Contacts of Structural Units in PDB entry:
4RVW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RVW entry

There is 1 chain in PDB entry 4RVW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 22PHE 734
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 4RVW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
39 43Right-handed alpha
Helix 2
2
A
48 53Right-handed alpha
Helix 3
3
A
117 123Right-handed 310
Helix 4
4
A
489 494Right-handed alpha
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There are 7 sheets in PDB entry 4RVW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 38first strand
Strand 2
A
109 115anti-parallel
Strand 3
A
131 136anti-parallel
Strand 4
A
82 84parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 64first strand
Strand 2
A
68 73anti-parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 164first strand
Strand 2
A
148 158anti-parallel
Strand 3
A
167 172anti-parallel
Strand 4
A
178 188anti-parallel
Strand 5
A
207 217anti-parallel
Strand 6
A
224 232anti-parallel
Strand 7
A
302 317anti-parallel
Strand 8
A
324 342anti-parallel
Strand 9
A
346 354anti-parallel
Strand 10
A
370 383anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 217first strand
Strand 2
A
235 237anti-parallel
Strand 3
A
302 317anti-parallel
Strand 4
A
324 342anti-parallel
Strand 5
A
357 363anti-parallel
Strand 6
A
370 383anti-parallel
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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 383first strand
Strand 2
A
402 414anti-parallel
Strand 3
A
418 429anti-parallel
Strand 4
A
459 470anti-parallel
Strand 5
A
475 486anti-parallel
Strand 6
A
515 528anti-parallel
Strand 7
A
531 542anti-parallel
Strand 8
A
575 587anti-parallel
Strand 9
A
593 607anti-parallel
Strand 10
A
630 631anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
593 607first strand
Strand 2
A
639 646anti-parallel
Strand 3
A
652 661anti-parallel
Strand 4
A
677 689anti-parallel
Strand 5
A
694 702anti-parallel
Strand 6
A
725 734anti-parallel
Strand 7
A
148 158anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
496 499first strand
Strand 2
A
504 507anti-parallel
Strand 3
A
567 572parallel
Strand 4
A
547 551anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il