Analysis of interatomic Contacts of Structural Units in PDB entry:
4RVY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RVY entry

There are 38 chains in PDB entry 4RVY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 11ALA 344
a
 ALA 11ALA 344
B
 GLY 2ARG 505
b
 GLY 2ARG 505
C
 ALA 23ASP 473
c
 ALA 23ASP 473
D
 GLU 11LEU 352
d
 GLU 11LEU 352
E
 THR 4LYS 84
e
 THR 4LYS 84
F
 SER 12ARG 45
f
 SER 12ARG 45
H
 ALA 2GLY 66
h
 ALA 2GLY 66
I
 MET 1GLU 38
i
 MET 1GLU 38
J
 SER 3LEU 40
j
 SER 3LEU 40
K
 LYS 10ARG 46
k
 LYS 10ARG 46
L
 MET 1ASN 37
l
 MET 1ASN 37
M
 MET 1LYS 34
m
 MET 1LYS 34
O
 THR 4ALA 246
o
 THR 4ALA 246
T
 MET 1THR 30
t
 MET 1THR 30
U
 GLU 8LYS 104
u
 GLU 8LYS 104
V
 ALA 1TYR 137
v
 ALA 1TYR 137
X
 THR 2SER 40
x
 THR 2SER 40
Y
 VAL 18LEU 46
y
 VAL 18LEU 46
Z
 MET 1VAL 62
z
 MET 1VAL 62
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are248 helices in PDB entry 4RVY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 22Right-handed alpha
Helix 2
2
A
30 55Right-handed alpha
Helix 3
3
A
70 74Right-handed 310
Helix 4
4
A
95 99Right-handed 310
Helix 5
5
A
101 108Right-handed alpha
Helix 6
6
A
109 137Right-handed alpha
Helix 7
7
A
142 159Right-handed alpha
Helix 8
8
A
159 166Right-handed alpha
Helix 9
9
A
167 171Right-handed 310
Helix 10
10
A
176 191Right-handed alpha
Helix 11
11
A
192 194Right-handed 310
Helix 12
12
A
195 222Right-handed alpha
Helix 13
13
A
232 237Right-handed 310
Helix 14
14
A
247 259Right-handed alpha
Helix 15
15
A
260 264Right-handed 310
Helix 16
16
A
267 294Right-handed alpha
Helix 17
17
A
316 332Right-handed alpha
Helix 18
18
a
12 22Right-handed alpha
Helix 19
19
a
30 55Right-handed alpha
Helix 20
20
a
70 74Right-handed 310
Helix 21
21
a
95 99Right-handed 310
Helix 22
22
a
101 108Right-handed alpha
Helix 23
23
a
109 137Right-handed alpha
Helix 24
24
a
142 159Right-handed alpha
Helix 25
25
a
159 166Right-handed alpha
Helix 26
26
a
167 171Right-handed 310
Helix 27
27
a
176 191Right-handed alpha
Helix 28
28
a
192 194Right-handed 310
Helix 29
29
a
195 222Right-handed alpha
Helix 30
30
a
232 237Right-handed 310
Helix 31
31
a
247 259Right-handed alpha
Helix 32
32
a
260 264Right-handed 310
Helix 33
33
a
267 294Right-handed alpha
Helix 34
34
a
316 332Right-handed alpha
Helix 35
35
B
4 13Right-handed 310
Helix 36
36
B
15 45Right-handed alpha
Helix 37
37
B
54 58Right-handed 310
Helix 38
38
B
62 69Right-handed alpha
Helix 39
39
B
92 117Right-handed alpha
Helix 40
40
B
120 124Right-handed 310
Helix 41
41
B
134 156Right-handed alpha
Helix 42
42
B
186 191Right-handed 310
Helix 43
43
B
194 219Right-handed alpha
Helix 44
44
B
222 229Right-handed alpha
Helix 45
45
B
233 259Right-handed alpha
Helix 46
46
B
264 269Right-handed alpha
Helix 47
47
B
271 277Right-handed alpha
Helix 48
48
B
278 294Right-handed alpha
Helix 49
49
B
297 304Right-handed alpha
Helix 50
50
B
306 313Right-handed alpha
Helix 51
51
B
314 322Right-handed 310
Helix 52
52
B
329 333Right-handed 310
Helix 53
53
B
391 396Right-handed alpha
Helix 54
54
B
413 425Right-handed alpha
Helix 55
55
B
446 475Right-handed alpha
Helix 56
56
B
476 479Right-handed 310
Helix 57
57
B
487 491Right-handed 310
Helix 58
58
B
501 505Right-handed 310
Helix 59
59
b
4 13Right-handed 310
Helix 60
60
b
15 45Right-handed alpha
Helix 61
61
b
54 58Right-handed 310
Helix 62
62
b
62 69Right-handed alpha
Helix 63
63
b
92 117Right-handed alpha
Helix 64
64
b
120 124Right-handed 310
Helix 65
65
b
134 156Right-handed alpha
Helix 66
66
b
186 191Right-handed 310
Helix 67
67
b
194 219Right-handed alpha
Helix 68
68
b
222 229Right-handed alpha
Helix 69
69
b
233 259Right-handed alpha
Helix 70
70
b
264 269Right-handed alpha
Helix 71
71
b
271 277Right-handed alpha
Helix 72
72
b
278 294Right-handed alpha
Helix 73
73
b
297 304Right-handed alpha
Helix 74
74
b
306 313Right-handed alpha
Helix 75
75
b
314 322Right-handed 310
Helix 76
76
b
329 333Right-handed 310
Helix 77
77
b
391 396Right-handed alpha
Helix 78
78
b
413 425Right-handed alpha
Helix 79
79
b
446 475Right-handed alpha
Helix 80
80
b
476 479Right-handed 310
Helix 81
81
b
487 491Right-handed 310
Helix 82
82
b
501 505Right-handed 310
Helix 83
83
C
27 32Right-handed alpha
Helix 84
84
C
34 43Right-handed 310
Helix 85
85
C
45 75Right-handed alpha
Helix 86
86
C
80 84Right-handed 310
Helix 87
87
C
87 95Right-handed alpha
Helix 88
88
C
100 104Right-handed 310
Helix 89
89
C
108 135Right-handed alpha
Helix 90
90
C
153 182Right-handed alpha
Helix 91
91
C
205 214Right-handed alpha
Helix 92
92
C
222 227Right-handed 310
Helix 93
93
C
229 254Right-handed alpha
Helix 94
94
C
257 264Right-handed alpha
Helix 95
95
C
267 293Right-handed alpha
Helix 96
96
C
298 303Right-handed alpha
Helix 97
97
C
305 324Right-handed alpha
Helix 98
98
C
353 359Right-handed 310
Helix 99
99
C
366 368Right-handed 310
Helix 100
100
C
376 383Right-handed alpha
Helix 101
101
C
385 397Right-handed alpha
Helix 102
102
C
421 454Right-handed alpha
Helix 103
103
C
464 469Right-handed 310
Helix 104
104
c
27 32Right-handed alpha
Helix 105
105
c
34 43Right-handed 310
Helix 106
106
c
45 75Right-handed alpha
Helix 107
107
c
80 84Right-handed 310
Helix 108
108
c
87 95Right-handed alpha
Helix 109
109
c
100 104Right-handed 310
Helix 110
110
c
108 135Right-handed alpha
Helix 111
111
c
153 182Right-handed alpha
Helix 112
112
c
205 214Right-handed alpha
Helix 113
113
c
222 227Right-handed 310
Helix 114
114
c
229 254Right-handed alpha
Helix 115
115
c
257 264Right-handed alpha
Helix 116
116
c
267 293Right-handed alpha
Helix 117
117
c
298 303Right-handed alpha
Helix 118
118
c
305 324Right-handed alpha
Helix 119
119
c
353 359Right-handed 310
Helix 120
120
c
366 368Right-handed 310
Helix 121
121
c
376 383Right-handed alpha
Helix 122
122
c
385 397Right-handed alpha
Helix 123
123
c
421 454Right-handed alpha
Helix 124
124
c
464 469Right-handed 310
Helix 125
125
D
13 23Right-handed alpha
Helix 126
126
D
30 55Right-handed alpha
Helix 127
127
D
66 70Right-handed 310
Helix 128
128
D
82 86Right-handed 310
Helix 129
129
D
100 107Right-handed alpha
Helix 130
130
D
108 137Right-handed alpha
Helix 131
131
D
140 158Right-handed alpha
Helix 132
132
D
158 164Right-handed alpha
Helix 133
133
D
166 170Right-handed 310
Helix 134
134
D
175 190Right-handed alpha
Helix 135
135
D
191 193Right-handed 310
Helix 136
136
D
194 220Right-handed alpha
Helix 137
137
D
231 235Right-handed 310
Helix 138
138
D
245 257Right-handed alpha
Helix 139
139
D
263 290Right-handed alpha
Helix 140
140
D
298 308Right-handed alpha
Helix 141
141
D
313 334Right-handed alpha
Helix 142
142
D
335 338Right-handed 310
Helix 143
143
D
342 346Right-handed 310
Helix 144
144
d
13 23Right-handed alpha
Helix 145
145
d
30 55Right-handed alpha
Helix 146
146
d
66 70Right-handed 310
Helix 147
147
d
82 86Right-handed 310
Helix 148
148
d
100 107Right-handed alpha
Helix 149
149
d
108 137Right-handed alpha
Helix 150
150
d
140 158Right-handed alpha
Helix 151
151
d
158 164Right-handed alpha
Helix 152
152
d
166 170Right-handed 310
Helix 153
153
d
175 190Right-handed alpha
Helix 154
154
d
191 193Right-handed 310
Helix 155
155
d
194 220Right-handed alpha
Helix 156
156
d
231 235Right-handed 310
Helix 157
157
d
245 257Right-handed alpha
Helix 158
158
d
263 290Right-handed alpha
Helix 159
159
d
298 308Right-handed alpha
Helix 160
160
d
313 334Right-handed alpha
Helix 161
161
d
335 338Right-handed 310
Helix 162
162
d
342 346Right-handed 310
Helix 163
163
E
9 14Right-handed alpha
Helix 164
164
E
16 40Right-handed alpha
Helix 165
165
E
41 48Right-handed alpha
Helix 166
166
E
71 82Right-handed alpha
Helix 167
167
e
9 14Right-handed alpha
Helix 168
168
e
16 40Right-handed alpha
Helix 169
169
e
41 48Right-handed alpha
Helix 170
170
e
71 82Right-handed alpha
Helix 171
171
F
17 41Right-handed alpha
Helix 172
172
f
17 41Right-handed alpha
Helix 173
173
H
5 12Right-handed alpha
Helix 174
174
H
13 16Right-handed 310
Helix 175
175
H
27 50Right-handed alpha
Helix 176
176
h
5 12Right-handed alpha
Helix 177
177
h
13 16Right-handed 310
Helix 178
178
h
27 50Right-handed alpha
Helix 179
179
I
2 25Right-handed alpha
Helix 180
180
I
26 30Right-handed 310
Helix 181
181
i
2 25Right-handed alpha
Helix 182
182
i
26 30Right-handed 310
Helix 183
183
J
9 33Right-handed alpha
Helix 184
184
j
9 33Right-handed alpha
Helix 185
185
K
12 17Right-handed 310
Helix 186
186
K
18 25Right-handed alpha
Helix 187
187
K
27 43Right-handed alpha
Helix 188
188
k
12 17Right-handed 310
Helix 189
189
k
18 25Right-handed alpha
Helix 190
190
k
27 43Right-handed alpha
Helix 191
191
L
13 37Right-handed alpha
Helix 192
192
l
13 37Right-handed alpha
Helix 193
193
M
6 31Right-handed alpha
Helix 194
194
m
6 31Right-handed alpha
Helix 195
195
O
6 11Right-handed alpha
Helix 196
196
O
14 18Right-handed 310
Helix 197
197
O
179 181Right-handed 310
Helix 198
198
O
182 187Right-handed alpha
Helix 199
199
o
6 11Right-handed alpha
Helix 200
200
o
14 18Right-handed 310
Helix 201
201
o
179 181Right-handed 310
Helix 202
202
o
182 187Right-handed alpha
Helix 203
203
T
2 23Right-handed alpha
Helix 204
204
t
2 23Right-handed alpha
Helix 205
205
U
11 17Right-handed alpha
Helix 206
206
U
18 23Right-handed 310
Helix 207
207
U
31 38Right-handed 310
Helix 208
208
U
43 53Right-handed alpha
Helix 209
209
U
57 64Right-handed 310
Helix 210
210
U
68 78Right-handed alpha
Helix 211
211
U
88 93Right-handed alpha
Helix 212
212
U
94 96Right-handed 310
Helix 213
213
u
11 17Right-handed alpha
Helix 214
214
u
18 23Right-handed 310
Helix 215
215
u
31 38Right-handed 310
Helix 216
216
u
43 53Right-handed alpha
Helix 217
217
u
57 64Right-handed 310
Helix 218
218
u
68 78Right-handed alpha
Helix 219
219
u
88 93Right-handed alpha
Helix 220
220
u
94 96Right-handed 310
Helix 221
221
V
22 37Right-handed alpha
Helix 222
222
V
37 42Right-handed alpha
Helix 223
223
V
43 45Right-handed 310
Helix 224
224
V
55 62Right-handed alpha
Helix 225
225
V
68 78Right-handed alpha
Helix 226
226
V
101 105Right-handed 310
Helix 227
227
V
108 127Right-handed alpha
Helix 228
228
V
128 130Right-handed 310
Helix 229
229
V
133 137Right-handed 310
Helix 230
230
v
22 37Right-handed alpha
Helix 231
231
v
37 42Right-handed alpha
Helix 232
232
v
43 45Right-handed 310
Helix 233
233
v
55 62Right-handed alpha
Helix 234
234
v
68 78Right-handed alpha
Helix 235
235
v
101 105Right-handed 310
Helix 236
236
v
108 127Right-handed alpha
Helix 237
237
v
128 130Right-handed 310
Helix 238
238
v
133 137Right-handed 310
Helix 239
239
X
4 35Right-handed alpha
Helix 240
240
x
4 35Right-handed alpha
Helix 241
241
Y
19 42Right-handed alpha
Helix 242
242
y
19 42Right-handed alpha
Helix 243
243
Z
2 29Right-handed alpha
Helix 244
244
Z
32 58Right-handed alpha
Helix 245
245
Z
59 61Right-handed 310
Helix 246
246
z
2 29Right-handed alpha
Helix 247
247
z
32 58Right-handed alpha
Helix 248
248
z
59 61Right-handed 310
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There are 28 sheets in PDB entry 4RVY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
A
174 175anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 298first strand
Strand 2
C
402 403parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
a
81 82first strand
Strand 2
a
174 175anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
a
297 298first strand
Strand 2
c
402 403parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 168first strand
Strand 2
B
177 179anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
377 380first strand
Strand 2
B
369 371anti-parallel
Strand 3
B
353 356anti-parallel
Strand 4
B
336 347anti-parallel
Strand 5
B
398 402anti-parallel
Strand 6
B
410 411anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
377 380first strand
Strand 2
B
369 371anti-parallel
Strand 3
B
353 356anti-parallel
Strand 4
B
336 347anti-parallel
Strand 5
B
429 433anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
b
166 168first strand
Strand 2
b
177 179anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
b
377 380first strand
Strand 2
b
369 371anti-parallel
Strand 3
b
353 356anti-parallel
Strand 4
b
336 347anti-parallel
Strand 5
b
398 402anti-parallel
Strand 6
b
410 411anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
b
377 380first strand
Strand 2
b
369 371anti-parallel
Strand 3
b
353 356anti-parallel
Strand 4
b
336 347anti-parallel
Strand 5
b
429 433anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
185 187first strand
Strand 2
C
195 197anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
341 343first strand
Strand 2
C
349 351anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
370 371first strand
Strand 2
C
374 375anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
185 187first strand
Strand 2
c
195 197anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
341 343first strand
Strand 2
c
349 351anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
370 371first strand
Strand 2
c
374 375anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
77 78first strand
Strand 2
D
173 174anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
d
77 78first strand
Strand 2
d
173 174anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
30 31first strand
Strand 2
O
135 136anti-parallel
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There are 10 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
65 67first strand
Strand 2
O
38 53anti-parallel
Strand 3
O
232 245anti-parallel
Strand 4
O
210 220anti-parallel
Strand 5
O
192 205anti-parallel
Strand 6
O
141 149anti-parallel
Strand 7
O
126 128anti-parallel
Strand 8
O
93 101anti-parallel
Strand 9
O
78 87anti-parallel
Strand 10
O
38 53anti-parallel
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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
69 70first strand
Strand 2
O
103 109anti-parallel
Strand 3
O
115 121anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
o
30 31first strand
Strand 2
o
135 136anti-parallel
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There are 10 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
o
65 67first strand
Strand 2
o
38 53anti-parallel
Strand 3
o
232 245anti-parallel
Strand 4
o
210 220anti-parallel
Strand 5
o
192 205anti-parallel
Strand 6
o
141 149anti-parallel
Strand 7
o
126 128anti-parallel
Strand 8
o
93 101anti-parallel
Strand 9
o
78 87anti-parallel
Strand 10
o
38 53anti-parallel
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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
o
69 70first strand
Strand 2
o
103 109anti-parallel
Strand 3
o
115 121anti-parallel
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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
25 26first strand
Strand 2
U
82 83parallel
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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
u
25 26first strand
Strand 2
u
82 83parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
9 11first strand
Strand 2
V
18 20anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
v
9 11first strand
Strand 2
v
18 20anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il