Analysis of interatomic Contacts of Structural Units in PDB entry:
4RWQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RWQ entry

There are 2 chains in PDB entry 4RWQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 346
B
 MET 1LEU 346
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 4RWQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 18Right-handed alpha
Helix 2
2
A
22 44Right-handed alpha
Helix 3
3
A
88 93Right-handed alpha
Helix 4
4
A
93 112Right-handed alpha
Helix 5
5
A
165 179Right-handed alpha
Helix 6
6
A
185 188Right-handed 310
Helix 7
7
A
189 199Right-handed alpha
Helix 8
8
A
201 223Right-handed alpha
Helix 9
9
A
224 226Right-handed 310
Helix 10
10
A
228 242Right-handed alpha
Helix 11
11
A
250 264Right-handed alpha
Helix 12
12
A
265 267Right-handed 310
Helix 13
13
A
280 292Right-handed alpha
Helix 14
14
A
312 326Right-handed alpha
Helix 15
15
A
329 333Right-handed 310
Helix 16
16
B
2 6Right-handed 310
Helix 17
17
B
10 18Right-handed alpha
Helix 18
18
B
22 44Right-handed alpha
Helix 19
19
B
88 93Right-handed alpha
Helix 20
20
B
93 112Right-handed alpha
Helix 21
21
B
165 180Right-handed alpha
Helix 22
22
B
185 188Right-handed 310
Helix 23
23
B
189 198Right-handed alpha
Helix 24
24
B
201 223Right-handed alpha
Helix 25
25
B
228 242Right-handed alpha
Helix 26
26
B
250 264Right-handed alpha
Helix 27
27
B
265 267Right-handed 310
Helix 28
28
B
280 292Right-handed alpha
Helix 29
29
B
312 327Right-handed alpha
Helix 30
30
B
329 334Right-handed alpha
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There are 5 sheets in PDB entry 4RWQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 65first strand
Strand 2
A
72 81anti-parallel
Strand 3
A
142 148parallel
Strand 4
A
133 137anti-parallel
Strand 5
A
117 120anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 65first strand
Strand 2
A
72 81anti-parallel
Strand 3
A
151 152parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 270first strand
Strand 2
A
297 299parallel
Strand 3
A
307 308anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 59first strand
Strand 2
B
76 81anti-parallel
Strand 3
B
143 152parallel
Strand 4
B
132 136anti-parallel
Strand 5
B
117 120anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
269 270first strand
Strand 2
B
297 300parallel
Strand 3
B
303 307anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il