Analysis of interatomic Contacts of Structural Units in PDB entry:
4RWR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RWR entry

There are 2 chains in PDB entry 4RWR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 63TYR 331
B
 VAL 63GLY 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 4RWR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
76 88Right-handed alpha
Helix 2
2
A
93 114Right-handed alpha
Helix 3
3
A
134 143Right-handed alpha
Helix 4
4
A
145 160Right-handed alpha
Helix 5
5
A
203 209Right-handed 310
Helix 6
6
A
220 228Right-handed alpha
Helix 7
7
A
261 269Right-handed alpha
Helix 8
8
A
299 308Right-handed alpha
Helix 9
9
A
311 320Right-handed alpha
Helix 10
10
A
329 331Right-handed 310
Helix 11
11
B
76 88Right-handed alpha
Helix 12
12
B
93 114Right-handed alpha
Helix 13
13
B
134 143Right-handed alpha
Helix 14
14
B
145 159Right-handed alpha
Helix 15
15
B
203 209Right-handed 310
Helix 16
16
B
220 228Right-handed alpha
Helix 17
17
B
261 269Right-handed alpha
Helix 18
18
B
299 308Right-handed alpha
Helix 19
19
B
311 320Right-handed alpha
Helix 20
20
B
329 331Right-handed 310
Back to top of page

There are 9 sheets in PDB entry 4RWR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
A
74 75anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 171first strand
Strand 2
A
163 167anti-parallel
Strand 3
A
324 327anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
297 298parallel
Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 280first strand
Strand 2
A
283 289anti-parallel
Strand 3
A
213 219anti-parallel
Strand 4
B
213 219parallel
Strand 5
B
283 289anti-parallel
Strand 6
B
275 280anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 243first strand
Strand 2
A
249 254anti-parallel
Strand 3
A
257 260anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 71first strand
Strand 2
B
74 75anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 171first strand
Strand 2
B
163 167anti-parallel
Strand 3
B
324 327anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 177first strand
Strand 2
B
297 298parallel
Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 243first strand
Strand 2
B
249 254anti-parallel
Strand 3
B
257 260anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il