Analysis of interatomic Contacts of Structural Units in PDB entry:
4RZM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4RZM entry

There are 2 chains in PDB entry 4RZM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -2PRO 280
B
 GLY -2PRO 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 4RZM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 21Right-handed alpha
Helix 2
2
A
22 28Right-handed alpha
Helix 3
3
A
47 61Right-handed alpha
Helix 4
4
A
122 126Right-handed 310
Helix 5
5
A
133 152Right-handed alpha
Helix 6
6
A
154 160Right-handed alpha
Helix 7
7
A
179 193Right-handed alpha
Helix 8
8
A
221 231Right-handed alpha
Helix 9
9
A
271 273Right-handed 310
Helix 10
10
B
3 21Right-handed alpha
Helix 11
11
B
22 28Right-handed alpha
Helix 12
12
B
47 61Right-handed alpha
Helix 13
13
B
93 97Right-handed 310
Helix 14
14
B
122 126Right-handed 310
Helix 15
15
B
133 152Right-handed alpha
Helix 16
16
B
154 161Right-handed alpha
Helix 17
17
B
179 193Right-handed alpha
Helix 18
18
B
221 231Right-handed alpha
Helix 19
19
B
271 273Right-handed 310
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There are 6 sheets in PDB entry 4RZM. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 46first strand
Strand 2
A
30 37anti-parallel
Strand 3
A
114 120parallel
Strand 4
A
99 108anti-parallel
Strand 5
A
78 86anti-parallel
Strand 6
A
64 67anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 178first strand
Strand 2
A
162 169anti-parallel
Strand 3
A
263 269parallel
Strand 4
A
246 257anti-parallel
Strand 5
A
210 220anti-parallel
Strand 6
A
196 204anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 178first strand
Strand 2
A
162 169anti-parallel
Strand 3
A
263 269parallel
Strand 4
A
246 257anti-parallel
Strand 5
A
275 278anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 46first strand
Strand 2
B
30 37anti-parallel
Strand 3
B
114 120parallel
Strand 4
B
98 108anti-parallel
Strand 5
B
78 87anti-parallel
Strand 6
B
64 67anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 178first strand
Strand 2
B
162 169anti-parallel
Strand 3
B
263 269parallel
Strand 4
B
246 257anti-parallel
Strand 5
B
210 220anti-parallel
Strand 6
B
196 204anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 178first strand
Strand 2
B
162 169anti-parallel
Strand 3
B
263 269parallel
Strand 4
B
246 257anti-parallel
Strand 5
B
275 278anti-parallel
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