Analysis of interatomic Contacts of Structural Units in PDB entry:
4S0F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4S0F entry

There are 2 chains in PDB entry 4S0F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 158GLU 722
B
 PHE 158GLU 722
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 4S0F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
158 163Right-handed alpha
Helix 2
2
A
165 201Right-handed alpha
Helix 3
3
A
202 252Right-handed alpha
Helix 4
4
A
254 261Right-handed alpha
Helix 5
5
A
262 305Right-handed alpha
Helix 6
6
A
305 354Right-handed alpha
Helix 7
7
A
354 362Right-handed alpha
Helix 8
8
A
364 417Right-handed alpha
Helix 9
9
A
421 466Right-handed alpha
Helix 10
10
A
469 474Right-handed alpha
Helix 11
11
A
524 533Right-handed alpha
Helix 12
12
A
554 561Right-handed alpha
Helix 13
13
A
576 581Right-handed alpha
Helix 14
14
A
588 599Right-handed alpha
Helix 15
15
A
601 607Right-handed alpha
Helix 16
16
A
624 639Right-handed alpha
Helix 17
17
A
653 669Right-handed alpha
Helix 18
18
A
680 685Right-handed alpha
Helix 19
19
A
703 710Right-handed alpha
Helix 20
20
A
713 722Right-handed alpha
Helix 21
21
B
159 163Right-handed alpha
Helix 22
22
B
165 196Right-handed alpha
Helix 23
23
B
202 252Right-handed alpha
Helix 24
24
B
254 261Right-handed alpha
Helix 25
25
B
262 305Right-handed alpha
Helix 26
26
B
305 354Right-handed alpha
Helix 27
27
B
354 362Right-handed alpha
Helix 28
28
B
364 417Right-handed alpha
Helix 29
29
B
421 466Right-handed alpha
Helix 30
30
B
467 470Right-handed 310
Helix 31
31
B
524 533Right-handed alpha
Helix 32
32
B
554 561Right-handed alpha
Helix 33
33
B
576 581Right-handed alpha
Helix 34
34
B
588 599Right-handed alpha
Helix 35
35
B
601 607Right-handed alpha
Helix 36
36
B
624 639Right-handed alpha
Helix 37
37
B
648 653Right-handed alpha
Helix 38
38
B
653 669Right-handed alpha
Helix 39
39
B
680 686Right-handed alpha
Helix 40
40
B
703 710Right-handed alpha
Helix 41
41
B
713 722Right-handed alpha
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There are 8 sheets in PDB entry 4S0F. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
505 509first strand
Strand 2
A
486 492anti-parallel
Strand 3
A
540 545anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
515 518first strand
Strand 2
A
689 694parallel
Strand 3
A
697 698anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
562 565first strand
Strand 2
A
643 647parallel
Strand 3
A
673 677parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
574 575first strand
Strand 2
A
615 616anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
505 509first strand
Strand 2
B
486 492anti-parallel
Strand 3
B
540 545anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
515 518first strand
Strand 2
B
689 694parallel
Strand 3
B
697 698anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
562 565first strand
Strand 2
B
643 647parallel
Strand 3
B
673 677parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
574 575first strand
Strand 2
B
615 616anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il