Analysis of interatomic Contacts of Structural Units in PDB entry:
4S3P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4S3P entry

There are 2 chains in PDB entry 4S3P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 691
B
 GLU 2LYS 565
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 4S3P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 13Right-handed alpha
Helix 2
2
A
30 41Right-handed alpha
Helix 3
3
A
134 139Right-handed alpha
Helix 4
4
A
149 153Right-handed 310
Helix 5
5
A
163 177Right-handed alpha
Helix 6
6
A
210 214Right-handed 310
Helix 7
7
A
215 218Right-handed 310
Helix 8
8
A
219 225Right-handed alpha
Helix 9
9
A
225 233Right-handed alpha
Helix 10
10
A
234 247Right-handed alpha
Helix 11
11
A
251 271Right-handed alpha
Helix 12
12
A
275 309Right-handed alpha
Helix 13
13
A
314 318Right-handed 310
Helix 14
14
A
319 324Right-handed 310
Helix 15
15
A
327 337Right-handed alpha
Helix 16
16
A
337 365Right-handed alpha
Helix 17
17
A
383 389Right-handed alpha
Helix 18
18
A
390 393Right-handed 310
Helix 19
19
A
419 426Right-handed alpha
Helix 20
20
A
428 440Right-handed alpha
Helix 21
21
A
449 453Right-handed 310
Helix 22
22
A
464 468Right-handed 310
Helix 23
23
A
474 490Right-handed alpha
Helix 24
24
A
502 512Right-handed alpha
Helix 25
25
A
521 523Right-handed 310
Helix 26
26
A
532 536Right-handed 310
Helix 27
27
A
551 557Right-handed alpha
Helix 28
28
A
558 567Right-handed alpha
Helix 29
29
A
572 597Right-handed alpha
Helix 30
30
A
614 627Right-handed alpha
Helix 31
31
A
636 641Right-handed alpha
Helix 32
32
A
666 673Right-handed alpha
Helix 33
33
A
673 690Right-handed alpha
Helix 34
34
B
3 13Right-handed alpha
Helix 35
35
B
30 41Right-handed alpha
Helix 36
36
B
134 139Right-handed alpha
Helix 37
37
B
149 153Right-handed 310
Helix 38
38
B
163 177Right-handed alpha
Helix 39
39
B
211 214Right-handed 310
Helix 40
40
B
215 218Right-handed 310
Helix 41
41
B
219 225Right-handed alpha
Helix 42
42
B
225 234Right-handed alpha
Helix 43
43
B
234 247Right-handed alpha
Helix 44
44
B
251 272Right-handed alpha
Helix 45
45
B
275 289Right-handed alpha
Helix 46
46
B
289 309Right-handed alpha
Helix 47
47
B
314 318Right-handed 310
Helix 48
48
B
319 323Right-handed 310
Helix 49
49
B
327 337Right-handed alpha
Helix 50
50
B
337 365Right-handed alpha
Helix 51
51
B
383 389Right-handed alpha
Helix 52
52
B
419 426Right-handed alpha
Helix 53
53
B
428 440Right-handed alpha
Helix 54
54
B
449 453Right-handed 310
Helix 55
55
B
464 468Right-handed 310
Helix 56
56
B
474 490Right-handed alpha
Helix 57
57
B
502 512Right-handed alpha
Helix 58
58
B
521 523Right-handed 310
Helix 59
59
B
532 536Right-handed 310
Helix 60
60
B
551 557Right-handed alpha
Helix 61
61
B
558 567Right-handed alpha
Helix 62
62
B
572 597Right-handed alpha
Helix 63
63
B
607 611Right-handed 310
Helix 64
64
B
614 627Right-handed alpha
Helix 65
65
B
636 641Right-handed alpha
Helix 66
66
B
666 671Right-handed alpha
Helix 67
67
B
673 689Right-handed alpha
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There are 11 sheets in PDB entry 4S3P. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 20first strand
Strand 2
A
26 28anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 61first strand
Strand 2
A
118 127parallel
Strand 3
A
107 115anti-parallel
Strand 4
A
75 81anti-parallel
Strand 5
A
87 93anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 68first strand
Strand 2
A
98 99anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 495first strand
Strand 2
A
444 447parallel
Strand 3
A
370 375parallel
Strand 4
A
181 184parallel
Strand 5
A
143 148parallel
Strand 6
A
632 635parallel
Strand 7
A
540 543parallel
Strand 8
A
516 519parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 412first strand
Strand 2
A
397 401anti-parallel
Strand 3
A
455 460anti-parallel
Strand 4
A
469 472anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 20first strand
Strand 2
B
26 28anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 61first strand
Strand 2
B
118 127parallel
Strand 3
B
107 115anti-parallel
Strand 4
B
75 81anti-parallel
Strand 5
B
87 93anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 69first strand
Strand 2
B
97 99anti-parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
492 495first strand
Strand 2
B
444 447parallel
Strand 3
B
370 375parallel
Strand 4
B
181 184parallel
Strand 5
B
143 148parallel
Strand 6
B
632 635parallel
Strand 7
B
540 543parallel
Strand 8
B
516 519parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
188 189first strand
Strand 2
B
205 209anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
411 415first strand
Strand 2
B
397 401anti-parallel
Strand 3
B
455 460anti-parallel
Strand 4
B
469 472anti-parallel
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