Analysis of interatomic Contacts of Structural Units in PDB entry:
4TJV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4TJV entry

There is 1 chain in PDB entry 4TJV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 18PRO 182
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 4TJV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 37Right-handed 310
Helix 2
AA2
A
72 77Right-handed 310
Helix 3
AA3
A
99 110Right-handed alpha
Helix 4
AA4
A
124 129Right-handed alpha
Helix 5
AA5
A
137 142Right-handed alpha
Helix 6
AA6
A
152 165Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4TJV.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 32first strand
Strand 2
A
38 45anti-parallel
Strand 3
A
148 151anti-parallel
Strand 4
A
114 118parallel
Strand 5
A
89 94parallel
Strand 6
A
55 61parallel
Strand 7
A
170 174anti-parallel
Strand 8
A
21 32anti-parallel
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