Analysis of interatomic Contacts of Structural Units in PDB entry:
4TJX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4TJX entry

There are 2 chains in PDB entry 4TJX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 23PRO 182
B
 ALA 1ASN 4
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 4TJX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 37Right-handed 310
Helix 2
AA2
A
73 77Right-handed 310
Helix 3
AA3
A
99 110Right-handed alpha
Helix 4
AA4
A
140 144Right-handed 310
Helix 5
AA5
A
152 165Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4TJX.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 32first strand
Strand 2
A
38 44anti-parallel
Strand 3
A
148 151anti-parallel
Strand 4
A
114 118parallel
Strand 5
A
89 94parallel
Strand 6
A
55 61parallel
Strand 7
A
169 174anti-parallel
Strand 8
A
25 32anti-parallel
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