Analysis of interatomic Contacts of Structural Units in PDB entry:
4TN0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4TN0 entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 6 chains in PDB entry 4TN0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 202ALA 265
A
 ALA 267PRO 512
B
 MET 202ALA 265
B
 ALA 267PRO 512
C
 MET 202ALA 265
C
 ALA 267PRO 512
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 4TN0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
230 238Right-handed 310
Helix 2
AA2
A
247 252Right-handed 310
Helix 3
AA3
A
265 275Right-handed alpha
Helix 4
AA4
A
290 298Right-handed alpha
Helix 5
AA5
A
329 332Right-handed 310
Helix 6
AA6
A
333 341Right-handed alpha
Helix 7
AA7
A
361 365Right-handed 310
Helix 8
AA8
A
367 371Right-handed 310
Helix 9
AA9
A
381 385Right-handed 310
Helix 10
AB1
A
386 413Right-handed alpha
Helix 11
AB2
A
434 436Right-handed 310
Helix 12
AB3
A
443 447Right-handed 310
Helix 13
AB4
A
448 452Right-handed alpha
Helix 14
AB5
A
464 473Right-handed alpha
Helix 15
AB6
A
481 490Right-handed alpha
Helix 16
AB7
A
498 502Right-handed 310
Helix 17
AB8
B
230 238Right-handed 310
Helix 18
AB9
B
247 252Right-handed 310
Helix 19
AC1
B
265 275Right-handed alpha
Helix 20
AC2
B
290 297Right-handed alpha
Helix 21
AC3
B
329 332Right-handed 310
Helix 22
AC4
B
333 341Right-handed alpha
Helix 23
AC5
B
361 365Right-handed 310
Helix 24
AC6
B
367 371Right-handed 310
Helix 25
AC7
B
381 385Right-handed 310
Helix 26
AC8
B
386 414Right-handed alpha
Helix 27
AC9
B
434 436Right-handed 310
Helix 28
AD1
B
448 452Right-handed alpha
Helix 29
AD2
B
462 473Right-handed alpha
Helix 30
AD3
B
481 490Right-handed alpha
Helix 31
AD4
B
498 502Right-handed 310
Helix 32
AD5
C
230 238Right-handed 310
Helix 33
AD6
C
247 252Right-handed 310
Helix 34
AD7
C
265 275Right-handed alpha
Helix 35
AD8
C
290 297Right-handed alpha
Helix 36
AD9
C
329 332Right-handed 310
Helix 37
AE1
C
333 343Right-handed alpha
Helix 38
AE2
C
361 365Right-handed 310
Helix 39
AE3
C
367 371Right-handed 310
Helix 40
AE4
C
381 385Right-handed 310
Helix 41
AE5
C
386 414Right-handed alpha
Helix 42
AE6
C
434 436Right-handed 310
Helix 43
AE7
C
448 452Right-handed alpha
Helix 44
AE8
C
464 473Right-handed alpha
Helix 45
AE9
C
481 490Right-handed alpha
Helix 46
AF1
C
498 502Right-handed 310
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There are 7 sheets in PDB entry 4TN0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 324first strand
Strand 2
A
301 306parallel
Strand 3
A
347 353parallel
Strand 4
A
219 225parallel
Strand 5
A
419 425parallel
Strand 6
A
453 460anti-parallel
Strand 7
A
254 260anti-parallel
Strand 8
A
477 478parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 432first strand
Strand 2
A
438 439anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
321 324first strand
Strand 2
B
301 306parallel
Strand 3
B
347 353parallel
Strand 4
B
219 225parallel
Strand 5
B
419 425parallel
Strand 6
B
453 460anti-parallel
Strand 7
B
254 260anti-parallel
Strand 8
B
477 478parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
431 432first strand
Strand 2
B
438 439anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
254 255first strand
Strand 2
C
456 460anti-parallel
Strand 3
C
419 425anti-parallel
Strand 4
C
219 225parallel
Strand 5
C
347 353parallel
Strand 6
C
301 306parallel
Strand 7
C
321 324parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
453 454first strand
Strand 2
C
259 260anti-parallel
Strand 3
C
477 478parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
431 432first strand
Strand 2
C
438 439anti-parallel
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