Analysis of interatomic Contacts of Structural Units in PDB entry:
4TPG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4TPG entry

There are 4 chains in PDB entry 4TPG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 8THR 492
B
 VAL 8THR 492
E
 ALA 1ALA 1
E
 ALA 3ALA 3
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 4TPG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 42Right-handed alpha
Helix 2
AA2
A
46 64Right-handed alpha
Helix 3
AA3
A
64 75Right-handed alpha
Helix 4
AA4
A
77 98Right-handed alpha
Helix 5
AA5
A
102 132Right-handed alpha
Helix 6
AA6
A
138 172Right-handed alpha
Helix 7
AA7
A
177 198Right-handed alpha
Helix 8
AA8
A
199 204Right-handed alpha
Helix 9
AA9
A
216 240Right-handed alpha
Helix 10
AB1
A
240 263Right-handed alpha
Helix 11
AB2
A
270 296Right-handed alpha
Helix 12
AB3
A
296 305Right-handed alpha
Helix 13
AB4
A
321 326Right-handed 310
Helix 14
AB5
A
327 341Right-handed alpha
Helix 15
AB6
A
357 376Right-handed alpha
Helix 16
AB7
A
388 405Right-handed alpha
Helix 17
AB8
A
425 445Right-handed alpha
Helix 18
AB9
A
446 448Right-handed 310
Helix 19
AC1
A
455 484Right-handed alpha
Helix 20
AC2
A
485 492Right-handed alpha
Helix 21
AC3
B
9 41Right-handed alpha
Helix 22
AC4
B
46 64Right-handed alpha
Helix 23
AC5
B
64 75Right-handed alpha
Helix 24
AC6
B
77 98Right-handed alpha
Helix 25
AC7
B
102 132Right-handed alpha
Helix 26
AC8
B
138 172Right-handed alpha
Helix 27
AC9
B
177 198Right-handed alpha
Helix 28
AD1
B
199 204Right-handed alpha
Helix 29
AD2
B
216 240Right-handed alpha
Helix 30
AD3
B
240 264Right-handed alpha
Helix 31
AD4
B
270 293Right-handed alpha
Helix 32
AD5
B
296 306Right-handed alpha
Helix 33
AD6
B
321 326Right-handed 310
Helix 34
AD7
B
327 341Right-handed alpha
Helix 35
AD8
B
357 376Right-handed alpha
Helix 36
AD9
B
388 405Right-handed alpha
Helix 37
AE1
B
409 414Right-handed alpha
Helix 38
AE2
B
425 445Right-handed alpha
Helix 39
AE3
B
446 448Right-handed 310
Helix 40
AE4
B
455 484Right-handed alpha
Helix 41
AE5
B
485 492Right-handed alpha
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There are no sheets in PDB entry 4TPG
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