Analysis of interatomic Contacts of Structural Units in PDB entry:
4TPP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4TPP entry

There are 2 chains in PDB entry 4TPP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 453ARG 757
B
 THR 453GLU 759
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 4TPP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
455 462Right-handed alpha
Helix 2
AA2
A
472 474Right-handed 310
Helix 3
AA3
A
475 488Right-handed alpha
Helix 4
AA4
A
489 493Right-handed 310
Helix 5
AA5
A
494 508Right-handed alpha
Helix 6
AA6
A
516 533Right-handed alpha
Helix 7
AA7
A
539 553Right-handed alpha
Helix 8
AA8
A
561 569Right-handed alpha
Helix 9
AA9
A
570 576Right-handed alpha
Helix 10
AB1
A
579 594Right-handed alpha
Helix 11
AB2
A
605 623Right-handed alpha
Helix 12
AB3
A
624 642Right-handed alpha
Helix 13
AB4
A
648 665Right-handed alpha
Helix 14
AB5
A
666 669Right-handed 310
Helix 15
AB6
A
671 695Right-handed alpha
Helix 16
AB7
A
701 709Right-handed 310
Helix 17
AB8
A
711 723Right-handed alpha
Helix 18
AB9
A
723 735Right-handed alpha
Helix 19
AC1
A
738 756Right-handed alpha
Helix 20
AC2
B
455 462Right-handed alpha
Helix 21
AC3
B
474 488Right-handed alpha
Helix 22
AC4
B
494 508Right-handed alpha
Helix 23
AC5
B
516 533Right-handed alpha
Helix 24
AC6
B
534 538Right-handed 310
Helix 25
AC7
B
539 552Right-handed alpha
Helix 26
AC8
B
561 569Right-handed alpha
Helix 27
AC9
B
570 576Right-handed alpha
Helix 28
AD1
B
579 594Right-handed alpha
Helix 29
AD2
B
605 622Right-handed alpha
Helix 30
AD3
B
623 626Right-handed 310
Helix 31
AD4
B
627 641Right-handed alpha
Helix 32
AD5
B
648 665Right-handed alpha
Helix 33
AD6
B
666 670Right-handed 310
Helix 34
AD7
B
671 696Right-handed alpha
Helix 35
AD8
B
701 710Right-handed 310
Helix 36
AD9
B
711 723Right-handed alpha
Helix 37
AE1
B
723 735Right-handed alpha
Helix 38
AE2
B
738 758Right-handed alpha
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There are no sheets in PDB entry 4TPP
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