Analysis of interatomic Contacts of Structural Units in PDB entry:
4TV5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4TV5 entry

There is 1 chain in PDB entry 4TV5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 4GLU 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4TV5. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
6 12Right-handed alpha
Helix 2
AA2
A
26 37Right-handed alpha
Helix 3
AA3
A
51 65Right-handed alpha
Helix 4
AA4
A
76 87Right-handed alpha
Helix 5
AA5
A
99 111Right-handed alpha
Helix 6
AA6
A
133 144Right-handed alpha
Helix 7
AA7
A
152 158Right-handed alpha
Helix 8
AA8
A
158 164Right-handed alpha
Helix 9
AA9
A
174 182Right-handed alpha
Helix 10
AB1
A
190 207Right-handed alpha
Helix 11
AB2
A
217 226Right-handed alpha
Helix 12
AB3
A
237 257Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4TV5.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
17 22first strand
Strand 2
A
40 44parallel
Strand 3
A
68 72parallel
Strand 4
A
91 94parallel
Strand 5
A
145 150parallel
Strand 6
A
170 173parallel
Strand 7
A
210 213parallel
Strand 8
A
231 236parallel
Strand 9
A
17 22parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il