Analysis of interatomic Contacts of Structural Units in PDB entry:
4TZH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4TZH entry

There are 2 chains in PDB entry 4TZH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 25SER 214
B
 ILE 29SER 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4TZH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 38Right-handed alpha
Helix 2
AA2
A
39 44Right-handed 310
Helix 3
AA3
A
58 64Right-handed 310
Helix 4
AA4
A
81 87Right-handed 310
Helix 5
AA5
A
104 110Right-handed 310
Helix 6
AA6
A
127 133Right-handed 310
Helix 7
AA7
A
150 156Right-handed 310
Helix 8
AA8
A
173 179Right-handed 310
Helix 9
AA9
A
196 204Right-handed alpha
Helix 10
AB1
B
33 38Right-handed alpha
Helix 11
AB2
B
39 44Right-handed 310
Helix 12
AB3
B
58 64Right-handed 310
Helix 13
AB4
B
81 87Right-handed 310
Helix 14
AB5
B
104 110Right-handed 310
Helix 15
AB6
B
127 133Right-handed 310
Helix 16
AB7
B
150 156Right-handed 310
Helix 17
AB8
B
173 179Right-handed 310
Helix 18
AB9
B
196 204Right-handed alpha
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There are 2 sheets in PDB entry 4TZH. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
69 71parallel
Strand 3
A
92 94parallel
Strand 4
A
115 117parallel
Strand 5
A
138 140parallel
Strand 6
A
161 163parallel
Strand 7
A
184 186parallel
Strand 8
A
210 212parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 48first strand
Strand 2
B
69 71parallel
Strand 3
B
92 94parallel
Strand 4
B
115 117parallel
Strand 5
B
138 140parallel
Strand 6
B
161 163parallel
Strand 7
B
184 186parallel
Strand 8
B
210 212parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il