Analysis of interatomic Contacts of Structural Units in PDB entry:
4U06


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4U06 entry

There is 1 chain in PDB entry 4U06 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 34ASP 377
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4U06. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 44Right-handed alpha
Helix 2
AA2
A
45 48Right-handed 310
Helix 3
AA3
A
62 68Right-handed 310
Helix 4
AA4
A
85 91Right-handed 310
Helix 5
AA5
A
108 114Right-handed 310
Helix 6
AA6
A
131 137Right-handed 310
Helix 7
AA7
A
154 160Right-handed 310
Helix 8
AA8
A
177 183Right-handed 310
Helix 9
AA9
A
200 206Right-handed 310
Helix 10
AB1
A
223 229Right-handed 310
Helix 11
AB2
A
246 252Right-handed 310
Helix 12
AB3
A
269 275Right-handed 310
Helix 13
AB4
A
292 298Right-handed 310
Helix 14
AB5
A
315 321Right-handed 310
Helix 15
AB6
A
338 344Right-handed 310
Helix 16
AB7
A
358 369Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 4U06.

There are 15 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
73 75parallel
Strand 3
A
96 98parallel
Strand 4
A
119 121parallel
Strand 5
A
142 144parallel
Strand 6
A
165 167parallel
Strand 7
A
188 190parallel
Strand 8
A
211 213parallel
Strand 9
A
234 236parallel
Strand 10
A
257 259parallel
Strand 11
A
280 282parallel
Strand 12
A
303 305parallel
Strand 13
A
326 328parallel
Strand 14
A
349 351parallel
Strand 15
A
373 375parallel
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